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MEGAN Community Edition - Interactive Exploration and Analysis of Large-Scale Microbiome Sequencing Data

PLoS computational biology, 2016-06, Vol.12 (6), p.e1004957-e1004957

2016

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Metacoder: An R package for visualization and manipulation of community taxonomic diversity data

PLoS computational biology, 2017-02, Vol.13 (2), p.e1005404

2017

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PhysiCell: An open source physics-based cell simulator for 3-D multicellular systems

PLoS computational biology, 2018-02, Vol.14 (2), p.e1005991-e1005991

2018

Volltextzugriff (PDF)

Reactome graph database: Efficient access to complex pathway data

PLoS computational biology, 2018-01, Vol.14 (1), p.e1005968-e1005968

2018

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A common framework for identifying linkage rules across different types of interactions

Functional ecology, 2016-12, Vol.30 (12), p.1894-1903

2016

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frair: an R package for fitting and comparing consumer functional responses

Methods in ecology and evolution, 2017-11, Vol.8 (11), p.1528-1534

2017

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boral – Bayesian Ordination and Regression Analysis of Multivariate Abundance Data in r

Methods in ecology and evolution, 2016-06, Vol.7 (6), p.744-750

2016

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Functional diversity metrics using kernel density n‐dimensional hypervolumes

Methods in ecology and evolution, 2020-08, Vol.11 (8), p.986-995

2020

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dispRity: A modular R package for measuring disparity

Methods in ecology and evolution, 2018-07, Vol.9 (7), p.1755-1763

2018

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Merging DNA metabarcoding and ecological network analysis to understand and build resilient terrestrial ecosystems

Functional ecology, 2016-12, Vol.30 (12), p.1904-1916

2016

Volltextzugriff (PDF)

Network measures in animal social network analysis: Their strengths, limits, interpretations and uses

Methods in ecology and evolution, 2021-01, Vol.12 (1), p.10-21

2021

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Predicting the pathogenicity of novel variants in mitochondrial tRNA with MitoTIP

PLoS computational biology, 2017-12, Vol.13 (12), p.e1005867-e1005867

2017

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codyn: An r package of community dynamics metrics

Methods in ecology and evolution, 2016-10, Vol.7 (10), p.1146-1151

2016

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ROTS: An R package for reproducibility-optimized statistical testing

PLoS computational biology, 2017-05, Vol.13 (5), p.e1005562-e1005562

2017

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inbreedR: an R package for the analysis of inbreeding based on genetic markers

Methods in ecology and evolution, 2016-11, Vol.7 (11), p.1331-1339

2016

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letsR: a new R package for data handling and analysis in macroecology

Methods in ecology and evolution, 2015-10, Vol.6 (10), p.1229-1234

2015

Volltextzugriff (PDF)

Phylogenetic and functional clustering illustrate the roles of adaptive radiation and dispersal filtering in jointly shaping late‐Quaternary mammal assemblages on oceanic islands

Ecology letters, 2022-05, Vol.25 (5), p.1250-1262

2022

Volltextzugriff (PDF)

PERFICT: A Re‐imagined foundation for predictive ecology

Ecology letters, 2022-06, Vol.25 (6), p.1345-1351

2022

Volltextzugriff (PDF)

R2ucare: An r package to perform goodness‐of‐fit tests for capture–recapture models

Methods in ecology and evolution, 2018-07, Vol.9 (7), p.1749-1754

2018

Volltextzugriff (PDF)

FIMTrack: An open source tracking and locomotion analysis software for small animals

PLoS computational biology, 2017-05, Vol.13 (5), p.e1005530-e1005530

2017

Volltextzugriff (PDF)

Atlantis: A spatially explicit end‐to‐end marine ecosystem model with dynamically integrated physics, ecology and socio‐economic modules

Methods in ecology and evolution, 2019-10, Vol.10 (10), p.1814-1819

2019

Volltextzugriff (PDF)

Phylogenetic congruence between Neotropical primates and plants is driven by frugivory

Ecology letters, 2022-02, Vol.25 (2), p.320-329

2022

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Phenology and flowering overlap drive specialisation in plant–pollinator networks

Ecology letters, 2021-12, Vol.24 (12), p.2648-2659

2021

Volltextzugriff (PDF)

A Bayesian network approach to trophic metacommunities shows that habitat loss accelerates top species extinctions

Ecology letters, 2020-12, Vol.23 (12), p.1849-1861

2020

Volltextzugriff (PDF)

Global trends in the trophic specialisation of flower‐visitor networks are explained by current and historical climate

Ecology letters, 2022-01, Vol.25 (1), p.113-124

2022

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MEGAN Community Edition - Interactive Exploration and Analysis of Large-Scale Microbiome Sequencing Data

Metacoder: An R package for visualization and manipulation of community taxonomic diversity data

PhysiCell: An open source physics-based cell simulator for 3-D multicellular systems

Reactome graph database: Efficient access to complex pathway data

A common framework for identifying linkage rules across different types of interactions

frair: an R package for fitting and comparing consumer functional responses

boral – Bayesian Ordination and Regression Analysis of Multivariate Abundance Data in r

Functional diversity metrics using kernel density n‐dimensional hypervolumes

dispRity: A modular R package for measuring disparity

Merging DNA metabarcoding and ecological network analysis to understand and build resilient terrestrial ecosystems

Network measures in animal social network analysis: Their strengths, limits, interpretations and uses

Predicting the pathogenicity of novel variants in mitochondrial tRNA with MitoTIP

codyn: An r package of community dynamics metrics

ROTS: An R package for reproducibility-optimized statistical testing

inbreedR: an R package for the analysis of inbreeding based on genetic markers

letsR: a new R package for data handling and analysis in macroecology

Phylogenetic and functional clustering illustrate the roles of adaptive radiation and dispersal filtering in jointly shaping late‐Quaternary mammal assemblages on oceanic islands

PERFICT: A Re‐imagined foundation for predictive ecology

R2ucare: An r package to perform goodness‐of‐fit tests for capture–recapture models

FIMTrack: An open source tracking and locomotion analysis software for small animals

Atlantis: A spatially explicit end‐to‐end marine ecosystem model with dynamically integrated physics, ecology and socio‐economic modules

Phylogenetic congruence between Neotropical primates and plants is driven by frugivory

Phenology and flowering overlap drive specialisation in plant–pollinator networks

A Bayesian network approach to trophic metacommunities shows that habitat loss accelerates top species extinctions

Global trends in the trophic specialisation of flower‐visitor networks are explained by current and historical climate

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