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InterPro in 2022

Nucleic acids research, 2023-01, Vol.51 (D1), p.D418

2023

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CATH: an expanded resource to predict protein function through structure and sequence

Nucleic acids research, 2017-01, Vol.45 (D1), p.D289

2017

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CATH: increased structural coverage of functional space

Nucleic acids research, 2021-01, Vol.49 (D1), p.D266

2021

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VarSite: Disease variants and protein structure

Protein science, 2020-01, Vol.29 (1), p.111-119

2020

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Protein function prediction using domain families

BMC bioinformatics, 2013-02, Vol.14 Suppl 3 (Suppl 3), p.S5-S5, Article S5

2013

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Computational approaches to predict protein functional families and functional sites

Current opinion in structural biology, 2021-10, Vol.70, p.108-122

2021

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Stability-activity tradeoffs constrain the adaptive evolution of RubisCO

Proceedings of the National Academy of Sciences - PNAS, 2014-02, Vol.111 (6), p.2223-2228

2014

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CATH: expanding the horizons of structure-based functional annotations for genome sequences

Nucleic acids research, 2019-01, Vol.47 (D1), p.D280

2019

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Functional classification of CATH superfamilies: a domain-based approach for protein function annotation

Bioinformatics, 2015-11, Vol.31 (21), p.3460-3467

2015

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Protein function annotation using protein domain family resources

Methods (San Diego, Calif.), 2016-01, Vol.93, p.24-34

2016

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Biological impact of mutually exclusive exon switching

PLoS computational biology, 2021-03, Vol.17 (3), p.e1008708-e1008708

2021

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New functional families (FunFams) in CATH to improve the mapping of conserved functional sites to 3D structures

Nucleic acids research, 2013-01, Vol.41 (Database issue), p.D490

2013

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Protein function prediction – the power of multiplicity

Trends in biotechnology (Regular ed.), 2009-04, Vol.27 (4), p.210-219

2009

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Generating functional protein variants with variational autoencoders

PLoS computational biology, 2021-02, Vol.17 (2), p.e1008736-e1008736

2021

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Gene3D: expanding the utility of domain assignments

Nucleic acids research, 2016-01, Vol.44 (D1), p.D404

2016

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Low-Density Lipoprotein Receptor Gene Familial Hypercholesterolemia Variant Database: Update and Pathological Assessment

Annals of human genetics, 2012-09, Vol.76 (5), p.387-401

2012

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Exploring the structure and function paradigm

Current opinion in structural biology, 2008-06, Vol.18 (3), p.394-402

2008

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Exploring the evolution of novel enzyme functions within structurally defined protein superfamilies

PLoS computational biology, 2012-03, Vol.8 (3), p.e1002403-e1002403

2012

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Analysis of temporal transcription expression profiles reveal links between protein function and developmental stages of Drosophila melanogaster

PLoS computational biology, 2017-10, Vol.13 (10), p.e1005791-e1005791

2017

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Inferring function using patterns of native disorder in proteins

PLoS computational biology, 2007-08, Vol.3 (8), p.e162-e162

2007

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Domain-Based and Family-Specific Sequence Identity Thresholds Increase the Levels of Reliable Protein Function Transfer

Journal of molecular biology, 2009-03, Vol.387 (2), p.416-430

2009

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Alpha Helices Are More Robust to Mutations than Beta Strands

PLoS computational biology, 2016-12, Vol.12 (12), p.e1005242-e1005242

2016

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An Ancient Fingerprint Indicates the Common Ancestry of Rossmann-Fold Enzymes Utilizing Different Ribose-Based Cofactors

PLoS biology, 2016-03, Vol.14 (3), p.e1002396-e1002396

2016

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ISCB's initial reaction to New England Journal of Medicine editorial on data sharing

Bioinformatics (Oxford, England), 2017-09, Vol.33 (18), p.2968-2968

2017

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InterPro in 2022

CATH: an expanded resource to predict protein function through structure and sequence

The InterPro protein families and domains database: 20 years on

CATH: increased structural coverage of functional space

VarSite: Disease variants and protein structure

Protein function prediction using domain families

Computational approaches to predict protein functional families and functional sites

Stability-activity tradeoffs constrain the adaptive evolution of RubisCO

CATH: expanding the horizons of structure-based functional annotations for genome sequences

Functional classification of CATH superfamilies: a domain-based approach for protein function annotation

Protein function annotation using protein domain family resources

Biological impact of mutually exclusive exon switching

New functional families (FunFams) in CATH to improve the mapping of conserved functional sites to 3D structures

Protein function prediction – the power of multiplicity

Generating functional protein variants with variational autoencoders

Gene3D: expanding the utility of domain assignments

Low-Density Lipoprotein Receptor Gene Familial Hypercholesterolemia Variant Database: Update and Pathological Assessment

Exploring the structure and function paradigm

Exploring the evolution of novel enzyme functions within structurally defined protein superfamilies

Analysis of temporal transcription expression profiles reveal links between protein function and developmental stages of Drosophila melanogaster

Inferring function using patterns of native disorder in proteins

Domain-Based and Family-Specific Sequence Identity Thresholds Increase the Levels of Reliable Protein Function Transfer

Alpha Helices Are More Robust to Mutations than Beta Strands

An Ancient Fingerprint Indicates the Common Ancestry of Rossmann-Fold Enzymes Utilizing Different Ribose-Based Cofactors

ISCB's initial reaction to New England Journal of Medicine editorial on data sharing

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