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Analysis of septins across kingdoms reveals orthology and new motifs

BMC evolutionary biology, 2007-07, Vol.7, p.103

2007

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UGbS-Flex, a novel bioinformatics pipeline for imputation-free SNP discovery in polyploids without a reference genome: finger millet as a case study

BMC plant biology, 2018-06, Vol.18 (1), p.117-117, Article 117

2018

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Resolving phylogenetic relationships of the recently radiated carnivorous plant genus Sarracenia using target enrichment

Molecular phylogenetics and evolution, 2015-04, Vol.85, p.76-87

2015

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Epistasis for Fitness-Related Quantitative Traits in Arabidopsis thaliana Grown in the Field and in the Greenhouse

Genetics (Austin), 2005-12, Vol.171 (4), p.2013-2027

2005

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A Standardized Kinesin Nomenclature

The Journal of cell biology, 2004-10, Vol.167 (1), p.19-22

2004

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Development of Transcriptomic Markers for Population Analysis Using Restriction Site Associated RNA Sequencing (RARseq)

PloS one, 2015-08, Vol.10 (8), p.e0134855-e0134855

2015

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Longitudinal trends in climate drive flowering time clines in North American Arabidopsis thaliana

Ecology and evolution, 2012-06, Vol.2 (6), p.1162-1180

2012

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Transcriptome Analysis of Sarracenia, an Insectivorous Plant

DNA research, 2011-08, Vol.18 (4), p.253-261

2011

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Mutational patterns in RNA secondary structure evolution examined in three RNA families

PloS one, 2011-06, Vol.6 (6), p.e20484-e20484

2011

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Human MicroRNA Target Prediction via Multi-Hypotheses Learning

Journal of computational biology, 2021-02, Vol.28 (2), p.117

2021

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Stable stem enabled Shannon entropies distinguish non-coding RNAs from random backgrounds

BMC bioinformatics, 2012-04, Vol.13 Suppl 5 (S5), p.S1-S1, Article S1

2012

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Fast and accurate search for non-coding RNA pseudoknot structures in genomes

Bioinformatics, 2008-10, Vol.24 (20), p.2281-2287

2008

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Differential gene expression of ARGININE DECARBOXYLASE ADC1 and ADC2 in Arabidopsis thaliana: characterization of transcriptional regulation during seed germination and seedling development

The New phytologist, 2004-09, Vol.163 (3), p.519-531

2004

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Species tree estimation of diploid Helianthus (Asteraceae) using target enrichment

American journal of botany, 2015-06, Vol.102 (6), p.910-920

2015

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Patterns of Chromatin-Modifications Discriminate Different Genomic Features in Arabidopsis

Tsinghua science and technology, 2013-10, Vol.18 (5), p.431-440

2013

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Accurate prediction of RNA nucleotide interactions with backbone k-tree model

Bioinformatics, 2015-08, Vol.31 (16), p.2660-2667

2015

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Information-theoretic uncertainty of SCFG-modeled folding space of the non-coding RNA

Journal of theoretical biology, 2013-02, Vol.318, p.140-163

2013

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A carnivorous plant genetic map: pitcher/insect-capture QTL on a genetic linkage map of Sarracenia

Life science alliance, 2018-12, Vol.1 (6), p.e201800146-e201800146

2018

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TRFolder-W: a web server for telomerase RNA structure prediction in yeast genomes

Bioinformatics (Oxford, England), 2012-10, Vol.28 (20), p.2696-2697

2012

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Stochastic modeling of RNA pseudoknotted structures: a grammatical approach

Bioinformatics, 2003, Vol.19 (suppl-1), p.i66-i73

2003

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Rapid ab initio prediction of RNA pseudoknots via graph tree decomposition

Journal of mathematical biology, 2008-01, Vol.56 (1-2), p.145-159

2008

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RNATOPS-W: a web server for RNA structure searches of genomes

Bioinformatics, 2009-04, Vol.25 (8), p.1080-1081

2009

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Efficient Parameterized Algorithms for Biopolymer Structure-Sequence Alignment

IEEE/ACM transactions on computational biology and bioinformatics, 2006-10, Vol.3 (4), p.423-432

2006

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Maximum likelihood methods reveal conservation of function among closely related kinesin families

Journal of molecular evolution, 2002-01, Vol.54 (1), p.42-53

2002

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Analyzing modular RNA structure reveals low global structural entropy in microRNA sequence

Journal of bioinformatics and computational biology, 2011-04, Vol.9 (2), p.283

2011

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Analysis of septins across kingdoms reveals orthology and new motifs

UGbS-Flex, a novel bioinformatics pipeline for imputation-free SNP discovery in polyploids without a reference genome: finger millet as a case study

Resolving phylogenetic relationships of the recently radiated carnivorous plant genus Sarracenia using target enrichment

Epistasis for Fitness-Related Quantitative Traits in Arabidopsis thaliana Grown in the Field and in the Greenhouse

A Standardized Kinesin Nomenclature

Development of Transcriptomic Markers for Population Analysis Using Restriction Site Associated RNA Sequencing (RARseq)

Longitudinal trends in climate drive flowering time clines in North American Arabidopsis thaliana

Transcriptome Analysis of Sarracenia, an Insectivorous Plant

Mutational patterns in RNA secondary structure evolution examined in three RNA families

Human MicroRNA Target Prediction via Multi-Hypotheses Learning

Stable stem enabled Shannon entropies distinguish non-coding RNAs from random backgrounds

Fast and accurate search for non-coding RNA pseudoknot structures in genomes

Differential gene expression of ARGININE DECARBOXYLASE ADC1 and ADC2 in Arabidopsis thaliana: characterization of transcriptional regulation during seed germination and seedling development

Species tree estimation of diploid Helianthus (Asteraceae) using target enrichment

Patterns of Chromatin-Modifications Discriminate Different Genomic Features in Arabidopsis

Accurate prediction of RNA nucleotide interactions with backbone k-tree model

Information-theoretic uncertainty of SCFG-modeled folding space of the non-coding RNA

A carnivorous plant genetic map: pitcher/insect-capture QTL on a genetic linkage map of Sarracenia

TRFolder-W: a web server for telomerase RNA structure prediction in yeast genomes

Stochastic modeling of RNA pseudoknotted structures: a grammatical approach

Rapid ab initio prediction of RNA pseudoknots via graph tree decomposition

RNATOPS-W: a web server for RNA structure searches of genomes

Efficient Parameterized Algorithms for Biopolymer Structure-Sequence Alignment

Maximum likelihood methods reveal conservation of function among closely related kinesin families

Analyzing modular RNA structure reveals low global structural entropy in microRNA sequence

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