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Protein-protein interaction network module changes associated with the vertebrate fin-to-limb transition

Scientific reports, 2023-12, Vol.13 (1), p.22594-22594, Article 22594

2023

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Integration of anatomy ontology data with protein–protein interaction networks improves the candidate gene prediction accuracy for anatomical entities

BMC bioinformatics, 2020-10, Vol.21 (1), p.1-442, Article 442

2020

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Developmental morphology of the axial skeleton of the zebrafish, Danio rerio (Ostariophysi: Cyprinidae)

Developmental dynamics, 2003-11, Vol.228 (3), p.337-357

2003

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Finite element analysis of mechanical behavior of human dysplastic hip joints: a systematic review

Osteoarthritis and cartilage, 2017-04, Vol.25 (4), p.438-447

2017

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rphenoscate: An R package for semantics‐aware evolutionary analyses of anatomical traits

Methods in ecology and evolution, 2023-10, Vol.14 (10), p.2531-2540

2023

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Phenotype ontologies: the bridge between genomics and evolution

Trends in ecology & evolution (Amsterdam), 2007-07, Vol.22 (7), p.345-350

2007

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Data Sources for Trait Databases: Comparing the Phenomic Content of Monographs and Evolutionary Matrices

PloS one, 2016-05, Vol.11 (5), p.e0155680-e0155680

2016

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Unification of multi-species vertebrate anatomy ontologies for comparative biology in Uberon

Journal of biomedical semantics, 2014-05, Vol.5 (1), p.21-21

2014

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Evolutionary characters, phenotypes and ontologies: curating data from the systematic biology literature

PloS one, 2010-05, Vol.5 (5), p.e10708-e10708

2010

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The Teleost Anatomy Ontology: Anatomical Representation for the Genomics Age

Systematic biology, 2010-07, Vol.59 (4), p.369-383

2010

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Construction and Immunogenicity Evaluation of Recombinant Influenza A Viruses Containing Chimeric Hemagglutinin Genes Derived from Genetically Divergent Influenza A H1N1 Subtype Viruses

PloS one, 2015-06, Vol.10 (6), p.e0127649-e0127649

2015

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Muscle Logic: New Knowledge Resource for Anatomy Enables Comprehensive Searches of the Literature on the Feeding Muscles of Mammals

PloS one, 2016-02, Vol.11 (2), p.e0149102-e0149102

2016

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Toward Synthesizing Our Knowledge of Morphology: Using Ontologies and Machine Reasoning to Extract Presence/Absence Evolutionary Phenotypes across Studies

Systematic biology, 2015-11, Vol.64 (6), p.936-952

2015

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Integrating Evolution and Development: The Need for Bioinformatics in Evo-Devo

Bioscience, 2006-04, Vol.56 (4), p.301-309

MABEE, PAULA M

2006

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A Logical Model of Homology for Comparative Biology

Systematic biology, 2020-03, Vol.69 (2), p.345

2020

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Emerging semantics to link phenotype and environment

PeerJ (San Francisco, CA), 2015-12, Vol.3, p.e1470-e1470, Article e1470

2015

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AN EXPERIMENTAL STUDY OF INTRASPECIFIC VARIATION, DEVELOPMENTAL TIMING, AND HETEROCHRONY IN FISHES

Evolution, 2000-12, Vol.54 (6), p.2091-2106

2000

Volltextzugriff (PDF)

Nascent Cybernetics, Humanism, and Some Scientistic Challenges

Journal of systemics, cybernetics and informatics, 2021-08, Vol.19 (4), p.40-52

Zachary M. Mabee

2021

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Automated Integration of Trees and Traits: A Case Study Using Paired Fin Loss Across Teleost Fishes

Systematic biology, 2018-07, Vol.67 (4), p.559

2018

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Phenoscape: Identifying Candidate Genes for Evolutionary Phenotypes

Molecular biology and evolution, 2016-01, Vol.33 (1), p.13-24

2016

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Development of the paired fins in the paddlefish, Polyodon spathula

Journal of morphology (1931), 2004-09, Vol.261 (3), p.334-344

2004

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The US National Ecological Observatory Network and the Global Biodiversity Framework: national research infrastructure with a global reach

Journal of Ecology and Environment, 2023, 47(4), , pp.219-227

2023

Volltextzugriff (PDF)

Development of the cranium and paired fins in the zebrafish Danio rerio (Ostariophysi, Cyprinidae)

Journal of morphology (1931), 1996-08, Vol.229 (2), p.121-160

1996

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A Dual Embryonic Origin for Vertebrate Mechanoreceptors

Science (American Association for the Advancement of Science), 1994-04, Vol.264 (5157), p.426-430

1994

Volltextzugriff (PDF)

Annotation of phenotypes using ontologies: a gold standard for the training and evaluation of natural language processing systems

Database : the journal of biological databases and curation, 2018-01, Vol.2018

2018

Volltextzugriff (PDF)

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Protein-protein interaction network module changes associated with the vertebrate fin-to-limb transition

Integration of anatomy ontology data with protein–protein interaction networks improves the candidate gene prediction accuracy for anatomical entities

Developmental morphology of the axial skeleton of the zebrafish, Danio rerio (Ostariophysi: Cyprinidae)

Finite element analysis of mechanical behavior of human dysplastic hip joints: a systematic review

rphenoscate: An R package for semantics‐aware evolutionary analyses of anatomical traits

Phenotype ontologies: the bridge between genomics and evolution

Data Sources for Trait Databases: Comparing the Phenomic Content of Monographs and Evolutionary Matrices

Unification of multi-species vertebrate anatomy ontologies for comparative biology in Uberon

Evolutionary characters, phenotypes and ontologies: curating data from the systematic biology literature

The Teleost Anatomy Ontology: Anatomical Representation for the Genomics Age

Construction and Immunogenicity Evaluation of Recombinant Influenza A Viruses Containing Chimeric Hemagglutinin Genes Derived from Genetically Divergent Influenza A H1N1 Subtype Viruses

Muscle Logic: New Knowledge Resource for Anatomy Enables Comprehensive Searches of the Literature on the Feeding Muscles of Mammals

Toward Synthesizing Our Knowledge of Morphology: Using Ontologies and Machine Reasoning to Extract Presence/Absence Evolutionary Phenotypes across Studies

Integrating Evolution and Development: The Need for Bioinformatics in Evo-Devo

A Logical Model of Homology for Comparative Biology

Emerging semantics to link phenotype and environment

AN EXPERIMENTAL STUDY OF INTRASPECIFIC VARIATION, DEVELOPMENTAL TIMING, AND HETEROCHRONY IN FISHES

Nascent Cybernetics, Humanism, and Some Scientistic Challenges

Automated Integration of Trees and Traits: A Case Study Using Paired Fin Loss Across Teleost Fishes

Phenoscape: Identifying Candidate Genes for Evolutionary Phenotypes

Development of the paired fins in the paddlefish, Polyodon spathula

The US National Ecological Observatory Network and the Global Biodiversity Framework: national research infrastructure with a global reach

Development of the cranium and paired fins in the zebrafish Danio rerio (Ostariophysi, Cyprinidae)

A Dual Embryonic Origin for Vertebrate Mechanoreceptors

Annotation of phenotypes using ontologies: a gold standard for the training and evaluation of natural language processing systems

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