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Genetic diversity of tumors with mismatch repair deficiency influences anti-PD-1 immunotherapy response

Science (American Association for the Advancement of Science), 2019-05, Vol.364 (6439), p.485-491

2019

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The Genomic Landscape of Endocrine-Resistant Advanced Breast Cancers

Cancer cell, 2018-09, Vol.34 (3), p.427-438.e6

2018

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Clinical Sequencing Defines the Genomic Landscape of Metastatic Colorectal Cancer

Cancer cell, 2018-01, Vol.33 (1), p.125-136.e3

2018

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The human gut microbiome: current knowledge, challenges, and future directions

Translational research : the journal of laboratory and clinical medicine, 2012-10, Vol.160 (4), p.246-257

2012

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The genetic landscape of endometrial clear cell carcinomas

The Journal of pathology, 2017-10, Vol.243 (2), p.230-241

2017

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Retained mismatch repair protein expression occurs in approximately 6% of microsatellite instability-high cancers and is associated with missense mutations in mismatch repair genes

Modern pathology, 2020-05, Vol.33 (5), p.871-879

2020

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Colorectal Carcinomas Containing Hypermethylated MLH1 Promoter and Wild-Type BRAF/KRAS Are Enriched for Targetable Kinase Fusions

Cancer research (Chicago, Ill.), 2019-03, Vol.79 (6), p.1047-1053

2019

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Whole-genome sequencing of multiple myeloma from diagnosis to plasma cell leukemia reveals genomic initiating events, evolution, and clonal tides

Blood, 2012-08, Vol.120 (5), p.1060-1066

2012

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Genomic Alterations in Fatal Forms of Non-Anaplastic Thyroid Cancer: Identification of MED12 and RBM10 as Novel Thyroid Cancer Genes Associated with Tumor Virulence

Clinical cancer research, 2017-10, Vol.23 (19), p.5970-5980

2017

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New DNA Methylation Markers for Pancreatic Cancer: Discovery, Tissue Validation, and Pilot Testing in Pancreatic Juice

Clinical cancer research, 2015-10, Vol.21 (19), p.4473-4481

2015

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Optimizing Workflows and Processing of Cytologic Samples for Comprehensive Analysis by Next-Generation Sequencing: Memorial Sloan Kettering Cancer Center Experience

Archives of pathology & laboratory medicine (1976), 2016-11, Vol.140 (11), p.1200-1205

2016

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Reliable Pan-Cancer Microsatellite Instability Assessment by Using Targeted Next-Generation Sequencing Data

JCO precision oncology, 2017-01 (1), p.1-17

2017

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Morphological characterization of colorectal cancers in The Cancer Genome Atlas reveals distinct morphology–molecular associations: clinical and biological implications

Modern pathology, 2017-04, Vol.30 (4), p.599-609

2017

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3' tag digital gene expression profiling of human brain and universal reference RNA using Illumina Genome Analyzer

BMC genomics, 2009-11, Vol.10 (1), p.531-531, Article 531

2009

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A Pan-Cancer Study of Somatic TERT Promoter Mutations and Amplification in 30,773 Tumors Profiled by Clinical Genomic Sequencing

The Journal of molecular diagnostics : JMD, 2021-02, Vol.23 (2), p.253-263

2021

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HiChIP: a high-throughput pipeline for integrative analysis of ChIP-Seq data

BMC bioinformatics, 2014-08, Vol.15 (1), p.280-280, Article 280

2014

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Chromosome 20q Amplification Defines a Subtype of Microsatellite Stable, Left-Sided Colon Cancers with Wild-type RAS/RAF and Better Overall Survival

Molecular cancer research, 2017-06, Vol.15 (6), p.708-713

2017

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Multi-platform analysis of microRNA expression measurements in RNA from fresh frozen and FFPE tissues

PloS one, 2013-01, Vol.8 (1), p.e52517-e52517

2013

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Mitochondrial Aging and Physical Decline: Insights From Three Generations of Women

The journals of gerontology. Series A, Biological sciences and medical sciences, 2015-11, Vol.70 (11), p.1409-1417

2015

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Evolution and potential function of fibrinogen-like domains across twelve Drosophila species

BMC genomics, 2008-05, Vol.9 (1), p.260-260

2008

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A novel bioinformatics pipeline for identification and characterization of fusion transcripts in breast cancer and normal cell lines

Nucleic acids research, 2011-08, Vol.39 (15), p.e100-e100

2011

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TNNI3K mutation in familial syndrome of conduction system disease, atrial tachyarrhythmia and dilated cardiomyopathy

Human molecular genetics, 2014-11, Vol.23 (21), p.5793-5804

2014

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Novel TRAF1-ALK fusion identified by deep RNA sequencing of anaplastic large cell lymphoma

Genes chromosomes & cancer, 2013-11, Vol.52 (11), p.1097-1102

2013

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Gene Expression Signatures Characterized by Longitudinal Stability and Interindividual Variability Delineate Baseline Phenotypic Groups with Distinct Responses to Immune Stimulation

The Journal of immunology (1950), 2018-03, Vol.200 (5), p.1917-1928

2018

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Somatic HNF1A mutations in the malignant transformation of hepatocellular adenomas: a retrospective analysis of data from MSK-IMPACT and TCGA

Human pathology, 2019-01, Vol.83, p.1-6

2019

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Genetic diversity of tumors with mismatch repair deficiency influences anti-PD-1 immunotherapy response

The Genomic Landscape of Endocrine-Resistant Advanced Breast Cancers

Clinical Sequencing Defines the Genomic Landscape of Metastatic Colorectal Cancer

The human gut microbiome: current knowledge, challenges, and future directions

The genetic landscape of endometrial clear cell carcinomas

Retained mismatch repair protein expression occurs in approximately 6% of microsatellite instability-high cancers and is associated with missense mutations in mismatch repair genes

Colorectal Carcinomas Containing Hypermethylated MLH1 Promoter and Wild-Type BRAF/KRAS Are Enriched for Targetable Kinase Fusions

Whole-genome sequencing of multiple myeloma from diagnosis to plasma cell leukemia reveals genomic initiating events, evolution, and clonal tides

Genomic Alterations in Fatal Forms of Non-Anaplastic Thyroid Cancer: Identification of MED12 and RBM10 as Novel Thyroid Cancer Genes Associated with Tumor Virulence

New DNA Methylation Markers for Pancreatic Cancer: Discovery, Tissue Validation, and Pilot Testing in Pancreatic Juice

Optimizing Workflows and Processing of Cytologic Samples for Comprehensive Analysis by Next-Generation Sequencing: Memorial Sloan Kettering Cancer Center Experience

Reliable Pan-Cancer Microsatellite Instability Assessment by Using Targeted Next-Generation Sequencing Data

Morphological characterization of colorectal cancers in The Cancer Genome Atlas reveals distinct morphology–molecular associations: clinical and biological implications

3' tag digital gene expression profiling of human brain and universal reference RNA using Illumina Genome Analyzer

A Pan-Cancer Study of Somatic TERT Promoter Mutations and Amplification in 30,773 Tumors Profiled by Clinical Genomic Sequencing

HiChIP: a high-throughput pipeline for integrative analysis of ChIP-Seq data

Chromosome 20q Amplification Defines a Subtype of Microsatellite Stable, Left-Sided Colon Cancers with Wild-type RAS/RAF and Better Overall Survival

Multi-platform analysis of microRNA expression measurements in RNA from fresh frozen and FFPE tissues

Mitochondrial Aging and Physical Decline: Insights From Three Generations of Women

Evolution and potential function of fibrinogen-like domains across twelve Drosophila species

A novel bioinformatics pipeline for identification and characterization of fusion transcripts in breast cancer and normal cell lines

TNNI3K mutation in familial syndrome of conduction system disease, atrial tachyarrhythmia and dilated cardiomyopathy

Novel TRAF1-ALK fusion identified by deep RNA sequencing of anaplastic large cell lymphoma

Gene Expression Signatures Characterized by Longitudinal Stability and Interindividual Variability Delineate Baseline Phenotypic Groups with Distinct Responses to Immune Stimulation

Somatic HNF1A mutations in the malignant transformation of hepatocellular adenomas: a retrospective analysis of data from MSK-IMPACT and TCGA

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