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OmicLoupe: facilitating biological discovery by interactive exploration of multiple omic datasets and statistical comparisons

BMC bioinformatics, 2021-03, Vol.22 (1), p.107-107, Article 107

2021

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Antibody-encoding repertoires of bone marrow and peripheral blood—a focus on IgE

Journal of allergy and clinical immunology, 2017-03, Vol.139 (3), p.1026-1030

2017

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mzML—a Community Standard for Mass Spectrometry Data

Molecular & cellular proteomics, 2011-01, Vol.10 (1), p.R110.000133, Article R110.000133

2011

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The quantification of zebrafish ocular-associated proteins provides hints for sex-biased visual impairments and perception

Heliyon, 2024-06, Vol.10 (12), p.e33057, Article e33057

2024

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DIANA--algorithmic improvements for analysis of data-independent acquisition MS data

Bioinformatics, 2015-02, Vol.31 (4), p.555-562

2015

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Comparative gut proteomics study revealing adaptive physiology of Eurasian spruce bark beetle, Ips typographus (Coleoptera: Scolytinae)

Frontiers in plant science, 2023, Vol.14, p.1157455-1157455

2023

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NLK-mediated phosphorylation of HDAC1 negatively regulates Wnt signaling

Molecular biology of the cell, 2017-01, Vol.28 (2), p.346-355

2017

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Antibody Heavy Chain Variable Domains of Different Germline Gene Origins Diversify through Different Paths

Frontiers in immunology, 2017-11, Vol.8 (NOV), p.1433-1433

2017

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Proteomics of PTI and Two ETI Immune Reactions in Potato Leaves

International journal of molecular sciences, 2019-09, Vol.20 (19), p.4726

2019

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Comparative Membrane-Associated Proteomics of Three Different Immune Reactions in Potato

International journal of molecular sciences, 2018-02, Vol.19 (2), p.538

2018

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Proteomic Analysis of Phytophthora infestans Reveals the Importance of Cell Wall Proteins in Pathogenicity

Molecular & cellular proteomics, 2017-11, Vol.16 (11), p.1958-1971

2017

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Proteome of the Nematode-Trapping Cells of the Fungus Monacrosporium haptotylum

Applied and Environmental Microbiology, 2013-08, Vol.79 (16), p.4993-5004

2013

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Choice of High-Throughput Proteomics Method Affects Data Integration with Transcriptomics and the Potential Use in Biomarker Discovery

Cancers, 2022-11, Vol.14 (23), p.5761

2022

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In Vitro Evolution of Antibodies Inspired by In Vivo Evolution

Frontiers in immunology, 2018-06, Vol.9 (JUN), p.1391-1391

2018

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NormalyzerDE: Online Tool for Improved Normalization of Omics Expression Data and High-Sensitivity Differential Expression Analysis

Journal of proteome research, 2019-02, Vol.18 (2), p.732-740

2019

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Leaf Apoplast of Field-Grown Potato Analyzed by Quantitative Proteomics and Activity-Based Protein Profiling

International journal of molecular sciences, 2021-11, Vol.22 (21), p.12033

2021

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PLK1 as a cooperating partner for BCL2-mediated antiapoptotic program in leukemia

Blood cancer journal (New York), 2023-09, Vol.13 (1), p.139-139, Article 139

2023

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TraML—A Standard Format for Exchange of Selected Reaction Monitoring Transition Lists

Molecular & cellular proteomics, 2012-04, Vol.11 (4), p.R111.015040, Article R111.015040

2012

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Normalyzer: A Tool for Rapid Evaluation of Normalization Methods for Omics Data Sets

Journal of proteome research, 2014-06, Vol.13 (6), p.3114-3120

2014

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Generic workflow for quality assessment of quantitative label-free LC-MS analysis

Proteomics (Weinheim), 2011-03, Vol.11 (6), p.1114-1124

2011

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Data on haplotype-supported immunoglobulin germline gene inference

Data in brief, 2017-08, Vol.13, p.620-640

2017

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Adjuvants in fungicide formulations can be skin sensitizers and cause different types of cell stress responses

Toxicology reports, 2022, Vol.9, p.2030-2041

2022

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A proteomics dataset capturing myeloid cell responses upon cellular exposure to fungicides, adjuvants and fungicide formulations

Data in brief, 2023-02, Vol.46, p.108878-108878, Article 108878

2023

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A label-free nano-liquid chromatography–mass spectrometry approach for quantitative serum peptidomics in Crohn's disease patients

Journal of chromatography. B, Analytical technologies in the biomedical and life sciences, 2009-10, Vol.877 (27), p.3127-3136

2009

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Automated multiplexed affinity-based enrichment of peptides for LC-MS/MS plasma proteomics

Proteomics (Weinheim), 2024-08, p.e2400049

2024

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OmicLoupe: facilitating biological discovery by interactive exploration of multiple omic datasets and statistical comparisons

Antibody-encoding repertoires of bone marrow and peripheral blood—a focus on IgE

mzML—a Community Standard for Mass Spectrometry Data

The quantification of zebrafish ocular-associated proteins provides hints for sex-biased visual impairments and perception

DIANA--algorithmic improvements for analysis of data-independent acquisition MS data

Comparative gut proteomics study revealing adaptive physiology of Eurasian spruce bark beetle, Ips typographus (Coleoptera: Scolytinae)

NLK-mediated phosphorylation of HDAC1 negatively regulates Wnt signaling

Antibody Heavy Chain Variable Domains of Different Germline Gene Origins Diversify through Different Paths

Proteomics of PTI and Two ETI Immune Reactions in Potato Leaves

Comparative Membrane-Associated Proteomics of Three Different Immune Reactions in Potato

Proteomic Analysis of Phytophthora infestans Reveals the Importance of Cell Wall Proteins in Pathogenicity

Proteome of the Nematode-Trapping Cells of the Fungus Monacrosporium haptotylum

Choice of High-Throughput Proteomics Method Affects Data Integration with Transcriptomics and the Potential Use in Biomarker Discovery

In Vitro Evolution of Antibodies Inspired by In Vivo Evolution

NormalyzerDE: Online Tool for Improved Normalization of Omics Expression Data and High-Sensitivity Differential Expression Analysis

Leaf Apoplast of Field-Grown Potato Analyzed by Quantitative Proteomics and Activity-Based Protein Profiling

PLK1 as a cooperating partner for BCL2-mediated antiapoptotic program in leukemia

TraML—A Standard Format for Exchange of Selected Reaction Monitoring Transition Lists

Normalyzer: A Tool for Rapid Evaluation of Normalization Methods for Omics Data Sets

Generic workflow for quality assessment of quantitative label-free LC-MS analysis

Data on haplotype-supported immunoglobulin germline gene inference

Adjuvants in fungicide formulations can be skin sensitizers and cause different types of cell stress responses

A proteomics dataset capturing myeloid cell responses upon cellular exposure to fungicides, adjuvants and fungicide formulations

A label-free nano-liquid chromatography–mass spectrometry approach for quantitative serum peptidomics in Crohn's disease patients

Automated multiplexed affinity-based enrichment of peptides for LC-MS/MS plasma proteomics

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