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Permutation importance: a corrected feature importance measure

Bioinformatics, 2010-05, Vol.26 (10), p.1340-1347

2010

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RnBeads 2.0: comprehensive analysis of DNA methylation data

Genome Biology, 2019-03, Vol.20 (1), p.55-55, Article 55

2019

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Improved scoring of functional groups from gene expression data by decorrelating GO graph structure

Bioinformatics, 2006-07, Vol.22 (13), p.1600-1607

2006

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Computing topological parameters of biological networks

Bioinformatics, 2008-01, Vol.24 (2), p.282-284

2008

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A new measure for functional similarity of gene products based on Gene Ontology

BMC bioinformatics, 2006-06, Vol.7 (1), p.302-302, Article 302

2006

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Computational epigenetics

Bioinformatics, 2008-01, Vol.24 (1), p.1-10

2008

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From hype to reality: data science enabling personalized medicine

BMC medicine, 2018-08, Vol.16 (1), p.150-150, Article 150

2018

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BinPacker: Packing-Based De Novo Transcriptome Assembly from RNA-seq Data

PLoS computational biology, 2016-02, Vol.12 (2), p.e1004772-e1004772

2016

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DNA Methylation Dynamics of Human Hematopoietic Stem Cell Differentiation

Cell stem cell, 2016-12, Vol.19 (6), p.808-822

2016

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Quantitative comparison of within-sample heterogeneity scores for DNA methylation data

Nucleic acids research, 2020-05, Vol.48 (8), p.e46-e46

2020

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Predicting protein ligand binding sites by combining evolutionary sequence conservation and 3D structure

PLoS computational biology, 2009-12, Vol.5 (12), p.e1000585

2009

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A comprehensive analysis of 195 DNA methylomes reveals shared and cell-specific features of partially methylated domains

Genome Biology, 2018-09, Vol.19 (1), p.150-150, Article 150

2018

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AltAnalyze and DomainGraph: analyzing and visualizing exon expression data

Nucleic acids research, 2010-07, Vol.38 (Web Server issue), p.W755-W762

2010

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Recruitment and activation of a lipid kinase by hepatitis C virus NS5A is essential for integrity of the membranous replication compartment

Cell host & microbe, 2011-01, Vol.9 (1), p.32-45

2011

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Genomic distribution and inter-sample variation of non-CpG methylation across human cell types

PLoS genetics, 2011-12, Vol.7 (12), p.e1002389-e1002389

2011

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Exposure to the gut microbiota drives distinct methylome and transcriptome changes in intestinal epithelial cells during postnatal development

Genome medicine, 2018-04, Vol.10 (1), p.27-27, Article 27

2018

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Geno2pheno[HCV] - A Web-based Interpretation System to Support Hepatitis C Treatment Decisions in the Era of Direct-Acting Antiviral Agents

PloS one, 2016-05, Vol.11 (5), p.e0155869-e0155869

2016

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BiQ Analyzer HT: locus-specific analysis of DNA methylation by high-throughput bisulfite sequencing

Nucleic acids research, 2011-07, Vol.39 (Web Server issue), p.W551-W556

2011

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Algorithms—ESA '93: First Annual European Symposium Bad Honnef, Germany September 30–October 2, 1993 Proceedings

Lengauer, Thomas

1993

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AbLang: an antibody language model for completing antibody sequences

Bioinformatics advances, 2022-01, Vol.2 (1), p.vbac046-vbac046

2022

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MRFalign: protein homology detection through alignment of Markov random fields

PLoS computational biology, 2014-03, Vol.10 (3), p.e1003500-e1003500

2014

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Inter-individual variation of DNA methylation and its implications for large-scale epigenome mapping

Nucleic acids research, 2008-06, Vol.36 (10), p.e55-e55

2008

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STACS 90: 7th Annual Symposium on Theoretical Aspects of Computer Science Rouen, France, February 22–24, 1990 Proceedings

1990

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Improving HIV coreceptor usage prediction in the clinic using hints from next-generation sequencing data

Bioinformatics, 2012-09, Vol.28 (18), p.i589-i595

2012

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A genome-wide association scan of nonsynonymous SNPs identifies a susceptibility variant for Crohn disease in ATG16L1

Nature genetics, 2007-02, Vol.39 (2), p.207-211

2007

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Permutation importance: a corrected feature importance measure

RnBeads 2.0: comprehensive analysis of DNA methylation data

Improved scoring of functional groups from gene expression data by decorrelating GO graph structure

Computing topological parameters of biological networks

A new measure for functional similarity of gene products based on Gene Ontology

Computational epigenetics

From hype to reality: data science enabling personalized medicine

BinPacker: Packing-Based De Novo Transcriptome Assembly from RNA-seq Data

DNA Methylation Dynamics of Human Hematopoietic Stem Cell Differentiation

Quantitative comparison of within-sample heterogeneity scores for DNA methylation data

Predicting protein ligand binding sites by combining evolutionary sequence conservation and 3D structure

A comprehensive analysis of 195 DNA methylomes reveals shared and cell-specific features of partially methylated domains

AltAnalyze and DomainGraph: analyzing and visualizing exon expression data

Recruitment and activation of a lipid kinase by hepatitis C virus NS5A is essential for integrity of the membranous replication compartment

Genomic distribution and inter-sample variation of non-CpG methylation across human cell types

Exposure to the gut microbiota drives distinct methylome and transcriptome changes in intestinal epithelial cells during postnatal development

Geno2pheno[HCV] - A Web-based Interpretation System to Support Hepatitis C Treatment Decisions in the Era of Direct-Acting Antiviral Agents

BiQ Analyzer HT: locus-specific analysis of DNA methylation by high-throughput bisulfite sequencing

Algorithms—ESA '93: First Annual European Symposium Bad Honnef, Germany September 30–October 2, 1993 Proceedings

AbLang: an antibody language model for completing antibody sequences

MRFalign: protein homology detection through alignment of Markov random fields

Inter-individual variation of DNA methylation and its implications for large-scale epigenome mapping

STACS 90: 7th Annual Symposium on Theoretical Aspects of Computer Science Rouen, France, February 22–24, 1990 Proceedings

Improving HIV coreceptor usage prediction in the clinic using hints from next-generation sequencing data

A genome-wide association scan of nonsynonymous SNPs identifies a susceptibility variant for Crohn disease in ATG16L1

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