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Estimating the timing of early eukaryotic diversification with multigene molecular clocks

Proceedings of the National Academy of Sciences - PNAS, 2011-08, Vol.108 (33), p.13624-13629

2011

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Reducing the impact of PCR-mediated recombination in molecular evolution and environmental studies using a new-generation high-fidelity DNA polymerase

BioTechniques, 2009-10, Vol.47 (4), p.857-866

2009

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Comprehensive phylogenetic reconstruction of amoebozoa based on concatenated analyses of SSU-rDNA and actin genes

PloS one, 2011-07, Vol.6 (7), p.e22780-e22780

2011

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The chastity of amoebae: re-evaluating evidence for sex in amoeboid organisms

Proceedings of the Royal Society. B, Biological sciences, 2011-07, Vol.278 (1715), p.2081

2011

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Expansion of the molecular and morphological diversity of Acanthamoebidae (Centramoebida, Amoebozoa) and identification of a novel life cycle type within the group

Biology direct, 2016-12, Vol.11 (1), p.69-69, Article 69

2016

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Uncovering Cryptic Diversity in Two Amoebozoan Species Using Complete Mitochondrial Genome Sequences

The Journal of eukaryotic microbiology, 2016-01, Vol.63 (1), p.112-122

2016

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Between a Pod and a Hard Test: The Deep Evolution of Amoebae

Molecular biology and evolution, 2017-09, Vol.34 (9), p.2258-2270

2017

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The Dynamic Nature of Eukaryotic Genomes

Molecular biology and evolution, 2008-04, Vol.25 (4), p.787-794

2008

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Genome skimming is a low-cost and robust strategy to assemble complete mitochondrial genomes from ethanol preserved specimens in biodiversity studies

PeerJ (San Francisco, CA), 2019-09, Vol.7, p.e7543-e7543, Article e7543

2019

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Carbonaceous and siliceous Neoproterozoic vase-shaped microfossils (Urucum Formation, Brazil) and the question of early protistan biomineralization

Journal of paleontology, 2017-05, Vol.91 (3), p.393-406

2017

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Comparative Characterization of Mitogenomes From Five Orders of Cestodes (Eucestoda: Tapeworms)

Frontiers in genetics, 2021-12, Vol.12, p.788871-788871

2021

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Phylogenetic reconstruction based on COI reshuffles the taxonomy of hyalosphenid shelled (testate) amoebae and reveals the convoluted evolution of shell plate shapes

Cladistics, 2016-12, Vol.32 (6), p.606-623

2016

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Testate Amoeba Functional Traits and Their Use in Paleoecology

Frontiers in ecology and evolution, 2020-10, Vol.8

2020

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How discordant morphological and molecular evolution among microorganisms can revise our notions of biodiversity on Earth

BioEssays, 2014-10, Vol.36 (10), p.950-959

2014

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All Eukaryotes Are Sexual, unless Proven Otherwise: Many So-Called Asexuals Present Meiotic Machinery and Might Be Able to Have Sex

BioEssays, 2019-06, Vol.41 (6), p.e1800246-e1800246

2019

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A comparative study indicates vertical inheritance and horizontal gene transfer of arsenic resistance-related genes in eukaryotes

Molecular phylogenetics and evolution, 2022-08, Vol.173, p.107479-107479, Article 107479

2022

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De novo Sequencing, Assembly, and Annotation of the Transcriptome for the Free‐Living Testate Amoeba Arcella intermedia

The Journal of eukaryotic microbiology, 2020-05, Vol.67 (3), p.383-392

2020

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The Phanerozoic diversification of silica-cycling testate amoebae and its possible links to changes in terrestrial ecosystems

PeerJ (San Francisco, CA), 2015-09, Vol.3, p.e1234-e1234

2015

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Complex Evolution of the Mismatch Repair System in Eukaryotes is Illuminated by Novel Archaeal Genomes

Journal of molecular evolution, 2021-02, Vol.89 (1-2), p.12-18

2021

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Current and future perspectives on the systematics, taxonomy and nomenclature of testate amoebae

European journal of protistology, 2016-09, Vol.55 (Pt B), p.105-117

2016

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Population and molecular responses to warming in Netzelia tuberspinifera – An endemic and sensitive protist from East Asia

The Science of the total environment, 2022-02, Vol.806 (Pt 4), p.150897-150897, Article 150897

2022

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Phylogenomics and Morphological Reconstruction of Arcellinida Testate Amoebae Highlight Diversity of Microbial Eukaryotes in the Neoproterozoic

Current biology, 2019-03, Vol.29 (6), p.991-1001.e3

2019

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Multicellularity arose several times in the evolution of eukaryotes (Response to DOI 10.1002/bies.201100187)

BioEssays, 2013-04, Vol.35 (4), p.339-347

2013

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Time to regulate microbial eukaryote nomenclature

Biological journal of the Linnean Society, 2012-11, Vol.107 (3), p.469-476

2012

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Taxonomic Identity in Microbial Eukaryotes: A Practical Approach Using the Testate Amoeba Centropyxis to Resolve Conflicts Between Old and New Taxonomic Descriptions

The Journal of eukaryotic microbiology, 2008-09, Vol.55 (5), p.409-416

2008

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Estimating the timing of early eukaryotic diversification with multigene molecular clocks

Reducing the impact of PCR-mediated recombination in molecular evolution and environmental studies using a new-generation high-fidelity DNA polymerase

Comprehensive phylogenetic reconstruction of amoebozoa based on concatenated analyses of SSU-rDNA and actin genes

The chastity of amoebae: re-evaluating evidence for sex in amoeboid organisms

Expansion of the molecular and morphological diversity of Acanthamoebidae (Centramoebida, Amoebozoa) and identification of a novel life cycle type within the group

Uncovering Cryptic Diversity in Two Amoebozoan Species Using Complete Mitochondrial Genome Sequences

Between a Pod and a Hard Test: The Deep Evolution of Amoebae

The Dynamic Nature of Eukaryotic Genomes

Genome skimming is a low-cost and robust strategy to assemble complete mitochondrial genomes from ethanol preserved specimens in biodiversity studies

Carbonaceous and siliceous Neoproterozoic vase-shaped microfossils (Urucum Formation, Brazil) and the question of early protistan biomineralization

Comparative Characterization of Mitogenomes From Five Orders of Cestodes (Eucestoda: Tapeworms)

Phylogenetic reconstruction based on COI reshuffles the taxonomy of hyalosphenid shelled (testate) amoebae and reveals the convoluted evolution of shell plate shapes

Testate Amoeba Functional Traits and Their Use in Paleoecology

How discordant morphological and molecular evolution among microorganisms can revise our notions of biodiversity on Earth

All Eukaryotes Are Sexual, unless Proven Otherwise: Many So-Called Asexuals Present Meiotic Machinery and Might Be Able to Have Sex

A comparative study indicates vertical inheritance and horizontal gene transfer of arsenic resistance-related genes in eukaryotes

De novo Sequencing, Assembly, and Annotation of the Transcriptome for the Free‐Living Testate Amoeba Arcella intermedia

The Phanerozoic diversification of silica-cycling testate amoebae and its possible links to changes in terrestrial ecosystems

Complex Evolution of the Mismatch Repair System in Eukaryotes is Illuminated by Novel Archaeal Genomes

Current and future perspectives on the systematics, taxonomy and nomenclature of testate amoebae

Population and molecular responses to warming in Netzelia tuberspinifera – An endemic and sensitive protist from East Asia

Phylogenomics and Morphological Reconstruction of Arcellinida Testate Amoebae Highlight Diversity of Microbial Eukaryotes in the Neoproterozoic

Multicellularity arose several times in the evolution of eukaryotes (Response to DOI 10.1002/bies.201100187)

Time to regulate microbial eukaryote nomenclature

Taxonomic Identity in Microbial Eukaryotes: A Practical Approach Using the Testate Amoeba Centropyxis to Resolve Conflicts Between Old and New Taxonomic Descriptions

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