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WIPI proteins: essential PtdIns3P effectors at the nascent autophagosome

Journal of cell science, 2015-01, Vol.128 (2), p.207-217

2015

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OptiType: precision HLA typing from next-generation sequencing data

Bioinformatics, 2014-12, Vol.30 (23), p.3310-3316

2014

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MultiLoc2: integrating phylogeny and Gene Ontology terms improves subcellular protein localization prediction

BMC bioinformatics, 2009-09, Vol.10 (1), p.274-274, Article 274

2009

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Large-scale discovery of protein interactions at residue resolution using co-evolution calculated from genomic sequences

Nature communications, 2021-03, Vol.12 (1), p.1396-1396, Article 1396

2021

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DIAMetAlyzer allows automated false-discovery rate-controlled analysis for data-independent acquisition in metabolomics

Nature communications, 2022-03, Vol.13 (1), p.1347-9, Article 1347

2022

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Grundlagen für die wissenschaftliche Nutzung umfangreicher Versorgungsdaten in Deutschland – Ergebnisse der AG Data Sharing der Medizininformatik-Initiative

Bundesgesundheitsblatt, Gesundheitsforschung, Gesundheitsschutz, 2024, Vol.67 (6), p.648-655

2024

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A computational platform for high-throughput analysis of RNA sequences and modifications by mass spectrometry

Nature communications, 2020-02, Vol.11 (1), p.926-926, Article 926

2020

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Sequence co-evolution gives 3D contacts and structures of protein complexes

eLife, 2014-09, Vol.3

2014

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SARS-CoV-2-derived peptides define heterologous and COVID-19-induced T cell recognition

Nature immunology, 2021-01, Vol.22 (1), p.74

2021

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YLoc--an interpretable web server for predicting subcellular localization

Nucleic acids research, 2010-07, Vol.38 (Web Server issue), p.W497

2010

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NRPSpredictor2--a web server for predicting NRPS adenylation domain specificity

Nucleic acids research, 2011-07, Vol.39 (Web Server issue), p.W362

2011

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Charting a dynamic DNA methylation landscape of the human genome

Nature (London), 2013-08, Vol.500 (7463), p.477-481

2013

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From hype to reality: data science enabling personalized medicine

BMC medicine, 2018-08, Vol.16 (1), p.150-150, Article 150

2018

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Going from where to why—interpretable prediction of protein subcellular localization

Bioinformatics, 2010-05, Vol.26 (9), p.1232-1238

2010

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The personalized cancer network explorer (PeCaX) as a visual analytics tool to support molecular tumor boards

BMC bioinformatics, 2023-03, Vol.24 (1), p.88-88, Article 88

2023

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Retention Time Prediction Improves Identification in Nontargeted Lipidomics Approaches

Analytical chemistry (Washington), 2015-08, Vol.87 (15), p.7698-7704

2015

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Photo-cross-linking and high-resolution mass spectrometry for assignment of RNA-binding sites in RNA-binding proteins

Nature methods, 2014-10, Vol.11 (10), p.1064

2014

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SANDPUMA: ensemble predictions of nonribosomal peptide chemistry reveal biosynthetic diversity across Actinobacteria

Bioinformatics (Oxford, England), 2017-10, Vol.33 (20), p.3202-3210

2017

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Induction of neoantigen-reactive T cells from healthy donors

Nature protocols, 2019-06, Vol.14 (6), p.1926-1943

2019

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Elucidating the evolutionary conserved DNA-binding specificities of WRKY transcription factors by molecular dynamics and in vitro binding assays

Nucleic acids research, 2013-11, Vol.41 (21), p.9764

2013

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Interplay of pH and Binding of Multivalent Metal Ions: Charge Inversion and Reentrant Condensation in Protein Solutions

The journal of physical chemistry. B, 2013-05, Vol.117 (18), p.5777-5787

2013

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Cross-linking of the endolysosomal system reveals potential flotillin structures and cargo

Nature communications, 2022-10, Vol.13 (1), p.6212-18, Article 6212

2022

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Genetic variation in human drug-related genes

Genome medicine, 2017-12, Vol.9 (1), p.117-117, Article 117

2017

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The mzIdentML Data Standard Version 1.2, Supporting Advances in Proteome Informatics

Molecular & cellular proteomics, 2017-07, Vol.16 (7), p.1275-1285

2017

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The immunopeptidomic landscape of ovarian carcinomas

Proceedings of the National Academy of Sciences - PNAS, 2017-11, Vol.114 (46), p.E9942-E9951

2017

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WIPI proteins: essential PtdIns3P effectors at the nascent autophagosome

OptiType: precision HLA typing from next-generation sequencing data

MultiLoc2: integrating phylogeny and Gene Ontology terms improves subcellular protein localization prediction

Large-scale discovery of protein interactions at residue resolution using co-evolution calculated from genomic sequences

DIAMetAlyzer allows automated false-discovery rate-controlled analysis for data-independent acquisition in metabolomics

Grundlagen für die wissenschaftliche Nutzung umfangreicher Versorgungsdaten in Deutschland – Ergebnisse der AG Data Sharing der Medizininformatik-Initiative

A computational platform for high-throughput analysis of RNA sequences and modifications by mass spectrometry

Sequence co-evolution gives 3D contacts and structures of protein complexes

SARS-CoV-2-derived peptides define heterologous and COVID-19-induced T cell recognition

YLoc--an interpretable web server for predicting subcellular localization

NRPSpredictor2--a web server for predicting NRPS adenylation domain specificity

Charting a dynamic DNA methylation landscape of the human genome

From hype to reality: data science enabling personalized medicine

Going from where to why—interpretable prediction of protein subcellular localization

The personalized cancer network explorer (PeCaX) as a visual analytics tool to support molecular tumor boards

Retention Time Prediction Improves Identification in Nontargeted Lipidomics Approaches

Photo-cross-linking and high-resolution mass spectrometry for assignment of RNA-binding sites in RNA-binding proteins

SANDPUMA: ensemble predictions of nonribosomal peptide chemistry reveal biosynthetic diversity across Actinobacteria

Induction of neoantigen-reactive T cells from healthy donors

Elucidating the evolutionary conserved DNA-binding specificities of WRKY transcription factors by molecular dynamics and in vitro binding assays

Interplay of pH and Binding of Multivalent Metal Ions: Charge Inversion and Reentrant Condensation in Protein Solutions

Cross-linking of the endolysosomal system reveals potential flotillin structures and cargo

Genetic variation in human drug-related genes

The mzIdentML Data Standard Version 1.2, Supporting Advances in Proteome Informatics

The immunopeptidomic landscape of ovarian carcinomas

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