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ProHits-viz: a suite of web tools for visualizing interaction proteomics data

Nature methods, 2017-07, Vol.14 (7), p.645-646

2017

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The GATOR–Rag GTPase pathway inhibits mTORC1 activation by lysosome-derived amino acids

Science (American Association for the Advancement of Science), 2020-10, Vol.370 (6514), p.351-356

2020

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Protein interaction network of the mammalian Hippo pathway reveals mechanisms of kinase-phosphatase interactions

Science signaling, 2013-11, Vol.6 (302), p.rs15

2013

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Conservation, variability and the modeling of active protein kinases

PloS one, 2007-10, Vol.2 (10), p.e982-e982

2007

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A web-tool for visualizing quantitative protein-protein interaction data

Proteomics (Weinheim), 2015-04, Vol.15 (8), p.1432-1436

2015

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MOB1 Mediated Phospho-recognition in the Core Mammalian Hippo Pathway

Molecular & cellular proteomics, 2017-06, Vol.16 (6), p.1098-1110

2017

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SAINTq: Scoring protein-protein interactions in affinity purification - mass spectrometry experiments with fragment or peptide intensity data

Proteomics (Weinheim), 2016-08, Vol.16 (15-16), p.2238-2245

2016

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Properties of Stress Granule and P-Body Proteomes

Molecular cell, 2019-10, Vol.76 (2), p.286-294

2019

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High-Density Proximity Mapping Reveals the Subcellular Organization of mRNA-Associated Granules and Bodies

Molecular cell, 2018-02, Vol.69 (3), p.517-532.e11

2018

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A proximity-dependent biotinylation map of a human cell

Nature (London), 2021-07, Vol.595 (7865), p.120-124

2021

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Proximity biotinylation and affinity purification are complementary approaches for the interactome mapping of chromatin-associated protein complexes

Journal of proteomics, 2015-04, Vol.118, p.81-94

2015

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MSPLIT-DIA: sensitive peptide identification for data-independent acquisition

Nature methods, 2015-12, Vol.12 (12), p.1106-1108

2015

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Interactome Rewiring Following Pharmacological Targeting of BET Bromodomains

Molecular cell, 2019-02, Vol.73 (3), p.621-638.e17

2019

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The role of conserved water molecules in the catalytic domain of protein kinases

Proteins, structure, function, and bioinformatics, 2009-08, Vol.76 (3), p.527-535

2009

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Gene Information eXtension (GIX): effortless retrieval of gene product information on any website

Nature methods, 2019-08, Vol.16 (8), p.665-666

2019

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CCM-3/STRIPAK promotes seamless tube extension through endocytic recycling

Nature communications, 2015-03, Vol.6 (1), p.6449-6449, Article 6449

2015

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Biochemical, proteomic, structural, and thermodynamic characterizations of integrin-linked kinase (ILK): cross-validation of the pseudokinase

The Journal of biological chemistry, 2011-06, Vol.286 (24), p.21886-21895

2011

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Data Independent Acquisition analysis in ProHits 4.0

Journal of proteomics, 2016-10, Vol.149, p.64-68

2016

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Phenotypic and Interaction Profiling of the Human Phosphatases Identifies Diverse Mitotic Regulators

Cell reports (Cambridge), 2016-11, Vol.17 (9), p.2488-2501

2016

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The myogenic kinome: protein kinases critical to mammalian skeletal myogenesis

Skeletal muscle, 2011-09, Vol.1 (1), p.29-29

2011

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A novel whole-cell lysate kinase assay identifies substrates of the p38 MAPK in differentiating myoblasts

Skeletal muscle, 2012-03, Vol.2 (1), p.5-5, Article 5

2012

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Author Correction: A proximity-dependent biotinylation map of a human cell

Nature (London), 2022-02, Vol.602 (7895), p.E16-E16

2022

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An Unbiased Proteomic Screen Reveals Caspase Cleavage Is Positively and Negatively Regulated by Substrate Phosphorylation

Molecular & cellular proteomics, 2014-05, Vol.13 (5), p.1184-1197

2014

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Profiling the kinome: Current capabilities and future challenges

Journal of proteomics, 2013-04, Vol.81, p.43-55

2013

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Heart of glass anchors Rasip1 at endothelial cell-cell junctions to support vascular integrity

eLife, 2016-01, Vol.5, p.e11394-e11394

2016

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ProHits-viz: a suite of web tools for visualizing interaction proteomics data

The GATOR–Rag GTPase pathway inhibits mTORC1 activation by lysosome-derived amino acids

Protein interaction network of the mammalian Hippo pathway reveals mechanisms of kinase-phosphatase interactions

Conservation, variability and the modeling of active protein kinases

A web-tool for visualizing quantitative protein-protein interaction data

MOB1 Mediated Phospho-recognition in the Core Mammalian Hippo Pathway

SAINTq: Scoring protein-protein interactions in affinity purification - mass spectrometry experiments with fragment or peptide intensity data

Properties of Stress Granule and P-Body Proteomes

High-Density Proximity Mapping Reveals the Subcellular Organization of mRNA-Associated Granules and Bodies

A proximity-dependent biotinylation map of a human cell

Proximity biotinylation and affinity purification are complementary approaches for the interactome mapping of chromatin-associated protein complexes

MSPLIT-DIA: sensitive peptide identification for data-independent acquisition

Interactome Rewiring Following Pharmacological Targeting of BET Bromodomains

The role of conserved water molecules in the catalytic domain of protein kinases

Gene Information eXtension (GIX): effortless retrieval of gene product information on any website

CCM-3/STRIPAK promotes seamless tube extension through endocytic recycling

Biochemical, proteomic, structural, and thermodynamic characterizations of integrin-linked kinase (ILK): cross-validation of the pseudokinase

Data Independent Acquisition analysis in ProHits 4.0

Phenotypic and Interaction Profiling of the Human Phosphatases Identifies Diverse Mitotic Regulators

The myogenic kinome: protein kinases critical to mammalian skeletal myogenesis

A novel whole-cell lysate kinase assay identifies substrates of the p38 MAPK in differentiating myoblasts

Author Correction: A proximity-dependent biotinylation map of a human cell

An Unbiased Proteomic Screen Reveals Caspase Cleavage Is Positively and Negatively Regulated by Substrate Phosphorylation

Profiling the kinome: Current capabilities and future challenges

Heart of glass anchors Rasip1 at endothelial cell-cell junctions to support vascular integrity

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