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Insights from structures of cancer-relevant pre-mRNA splicing factors

Current opinion in genetics & development, 2018-02, Vol.48, p.57-66

Kielkopf, Clara L

2018

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Wild-Type U2AF1 Antagonizes the Splicing Program Characteristic of U2AF1-Mutant Tumors and Is Required for Cell Survival

PLoS genetics, 2016-10, Vol.12 (10), p.e1006384-e1006384

2016

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Splicing Factor Mutations in Myelodysplasias: Insights from Spliceosome Structures

Trends in genetics, 2017-05, Vol.33 (5), p.336-348

2017

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Unmasking the U2AF homology motif family: a bona fide protein-protein interaction motif in disguise

RNA (Cambridge), 2016-12, Vol.22 (12), p.1795-1807

2016

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Representative cancer-associated U2AF2 mutations alter RNA interactions and splicing

The Journal of biological chemistry, 2020-12, Vol.295 (50), p.17148-17157

2020

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Pre-mRNA splicing factor U2AF2 recognizes distinct conformations of nucleotide variants at the center of the pre-mRNA splice site signal

Nucleic acids research, 2022-05, Vol.50 (9), p.5299

2022

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Cancer-Associated Mutations Mapped on High-Resolution Structures of the U2AF2 RNA Recognition Motifs

Biochemistry (Easton), 2017-09, Vol.56 (36), p.4757-4761

2017

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Staufen1 dimerizes through a conserved motif and a degenerate dsRNA-binding domain to promote mRNA decay

Nature structural & molecular biology, 2013-04, Vol.20 (4), p.515

2013

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U2AF homology motifs: protein recognition in the RRM world

Genes & development, 2004-07, Vol.18 (13), p.1513-1526

2004

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Structural Basis for Polypyrimidine Tract Recognition by the Essential Pre-mRNA Splicing Factor U2AF65

Molecular cell, 2006-07, Vol.23 (1), p.49-59

2006

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Three RNA Recognition Motifs Participate in RNA Recognition and Structural Organization by the Pro-Apoptotic Factor TIA-1

Journal of molecular biology, 2012-01, Vol.415 (4), p.727-740

2012

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Structural Basis for NADH/NAD+ Redox Sensing by a Rex Family Repressor

Molecular cell, 2010-05, Vol.38 (4), p.563-575

2010

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Structure-guided U2AF⁶⁵ variant improves recognition and splicing of a defective pre-mRNA

Proceedings of the National Academy of Sciences - PNAS, 2014-12, Vol.111 (49), p.17420-17425

2014

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An extended U2AF65–RNA-binding domain recognizes the 3′ splice site signal

Nature communications, 2016-03, Vol.7 (1), p.10950-14, Article 10950

2016

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Structures of SF3b1 reveal a dynamic Achilles heel of spliceosome assembly: Implications for cancer-associated abnormalities and drug discovery

Biochimica et biophysica acta. Gene regulatory mechanisms, 2019-11, Vol.1862 (11-12), p.194440-194440, Article 194440

2019

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Different Requirements of the Kinase and UHM Domains of KIS for Its Nuclear Localization and Binding to Splicing Factors

Journal of molecular biology, 2008-09, Vol.381 (3), p.748-762

2008

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Dynamic stacking of an expected branch point adenosine in duplexes containing pseudouridine-modified or unmodified U2 snRNA sites

Biochemical and biophysical research communications, 2019-04, Vol.511 (2), p.416-421

2019

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Dividing and Conquering the Family of RNA Recognition Motifs: A Representative Case Based on hnRNP L

Journal of molecular biology, 2015-09, Vol.427 (19), p.2997-3000

2015

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The pre-mRNA splicing and transcription factor Tat-SF1 is a functional partner of the spliceosome SF3b1 subunit via a U2AF homology motif interface

The Journal of biological chemistry, 2019-02, Vol.294 (8), p.2892-5793

2019

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Cancer-relevant Splicing Factor CAPERα Engages the Essential Splicing Factor SF3b155 in a Specific Ternary Complex

The Journal of biological chemistry, 2014-06, Vol.289 (25), p.17325-17337

2014

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An extended U2AF(65)-RNA-binding domain recognizes the 3' splice site signal

Nature communications, 2016-03, Vol.7, p.10950-10950

2016

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Sodium Dodecyl Sulfate-Polyacrylamide Gel Electrophoresis of Proteins

Cold Spring Harbor protocols, 2021-12, Vol.2021 (12)

2021

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A synthetic small molecule stalls pre-mRNA splicing by promoting an early-stage U2AF2-RNA complex

Cell chemical biology, 2021-08, Vol.28 (8), p.1145-1157.e6

2021

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Cus2 enforces the first ATP-dependent step of splicing by binding to yeast SF3b1 through a UHM-ULM interaction

RNA (Cambridge), 2019-08, Vol.25 (8), p.1020-1037

2019

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A UHM–ULM interface with unusual structural features contributes to U2AF2 and SF3B1 association for pre-mRNA splicing

The Journal of biological chemistry, 2022-08, Vol.298 (8), p.102224-102224, Article 102224

2022

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Insights from structures of cancer-relevant pre-mRNA splicing factors

Wild-Type U2AF1 Antagonizes the Splicing Program Characteristic of U2AF1-Mutant Tumors and Is Required for Cell Survival

Splicing Factor Mutations in Myelodysplasias: Insights from Spliceosome Structures

Unmasking the U2AF homology motif family: a bona fide protein-protein interaction motif in disguise

Representative cancer-associated U2AF2 mutations alter RNA interactions and splicing

Pre-mRNA splicing factor U2AF2 recognizes distinct conformations of nucleotide variants at the center of the pre-mRNA splice site signal

Cancer-Associated Mutations Mapped on High-Resolution Structures of the U2AF2 RNA Recognition Motifs

Staufen1 dimerizes through a conserved motif and a degenerate dsRNA-binding domain to promote mRNA decay

U2AF homology motifs: protein recognition in the RRM world

Structural Basis for Polypyrimidine Tract Recognition by the Essential Pre-mRNA Splicing Factor U2AF65

Three RNA Recognition Motifs Participate in RNA Recognition and Structural Organization by the Pro-Apoptotic Factor TIA-1

Structural Basis for NADH/NAD+ Redox Sensing by a Rex Family Repressor

Structure-guided U2AF⁶⁵ variant improves recognition and splicing of a defective pre-mRNA

An extended U2AF65–RNA-binding domain recognizes the 3′ splice site signal

Structures of SF3b1 reveal a dynamic Achilles heel of spliceosome assembly: Implications for cancer-associated abnormalities and drug discovery

Different Requirements of the Kinase and UHM Domains of KIS for Its Nuclear Localization and Binding to Splicing Factors

Dynamic stacking of an expected branch point adenosine in duplexes containing pseudouridine-modified or unmodified U2 snRNA sites

Dividing and Conquering the Family of RNA Recognition Motifs: A Representative Case Based on hnRNP L

The pre-mRNA splicing and transcription factor Tat-SF1 is a functional partner of the spliceosome SF3b1 subunit via a U2AF homology motif interface

Cancer-relevant Splicing Factor CAPERα Engages the Essential Splicing Factor SF3b155 in a Specific Ternary Complex

An extended U2AF(65)-RNA-binding domain recognizes the 3' splice site signal

Sodium Dodecyl Sulfate-Polyacrylamide Gel Electrophoresis of Proteins

A synthetic small molecule stalls pre-mRNA splicing by promoting an early-stage U2AF2-RNA complex

Cus2 enforces the first ATP-dependent step of splicing by binding to yeast SF3b1 through a UHM-ULM interaction

A UHM–ULM interface with unusual structural features contributes to U2AF2 and SF3B1 association for pre-mRNA splicing

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