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Adaptive and non-adaptive gene expression responses in prostate cancer during androgen deprivation

PloS one, 2023-02, Vol.18 (2), p.e0281645-e0281645

2023

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Functional human cell-based vascularised cardiac tissue model for biomedical research and testing

Scientific reports, 2022-08, Vol.12 (1), p.13459-13459, Article 13459

2022

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AR and ERG drive the expression of prostate cancer specific long noncoding RNAs

Oncogene, 2020-07, Vol.39 (30), p.5241-5251

2020

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Previously reported CCDC26 risk variant and novel germline variants in GALNT13, AR, and MYO10 associated with familial glioma in Finland

Scientific reports, 2024-05, Vol.14 (1), p.11562-11562, Article 11562

2024

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Clinical association analysis of ependymomas and pilocytic astrocytomas reveals elevated FGFR3 and FGFR1 expression in aggressive ependymomas

BMC cancer, 2017-05, Vol.17 (1), p.310-12, Article 310

2017

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Balance between noise and information flow maximizes set complexity of network dynamics

PloS one, 2013-03, Vol.8 (3), p.e56523-e56523

2013

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Measures for information propagation in Boolean networks

Physica. D, 2007-03, Vol.227 (1), p.100-104

2007

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Information-theoretic analysis of the dynamics of an executable biological model

PloS one, 2013-03, Vol.8 (3), p.e59303-e59303

2013

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Computational Characterization of Suppressive Immune Microenvironments in Glioblastoma

Cancer research (Chicago, Ill.), 2018-10, Vol.78 (19), p.5574-5585

2018

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Nonmalignant AR-positive prostate epithelial cells and cancer cells respond differently to androgen

Endocrine-related cancer, 2022-12, Vol.29 (12), p.717-733

2022

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Unsupervised clustering of brain tumor leukocytes to reveal atypical lymphoid cell subsets

Journal of clinical oncology, 2024-08, Vol.42 (23_suppl), p.25-25

2024

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Abstract LB-173: DNA methylation analysis reveals epigenetic regulation of neural differentiation in AT/RTs

Cancer research (Chicago, Ill.), 2020-08, Vol.80 (16_Supplement), p.LB-173-LB-173

2020

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Strong FGFR3 staining is a marker for FGFR3 fusions in diffuse gliomas

Neuro-oncology (Charlottesville, Va.), 2017-09, Vol.19 (9), p.1206-1216

2017

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Proprotein convertase subtilisin/kexin type 9 regulates the production of acute‐phase reactants from the liver

Liver international, 2021-10, Vol.41 (10), p.2511-2522

2021

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Identification of long noncoding RNAs with aberrant expression in prostate cancer metastases

Endocrine-related cancer, 2023-08, Vol.30 (8), p.1

2023

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Spatial cumulant models enable spatially informed treatment strategies and analysis of local interactions in cancer systems

Journal of mathematical biology, 2023, Vol.86 (5), p.68-68, Article 68

2023

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EPCO-34. INTEGRATIVE DNA METHYLATION ANALYSIS OF PEDIATRIC BRAIN TUMORS REVEALS TUMOR TYPE-SPECIFIC DEVELOPMENTAL TRAJECTORIES AND EPIGENETIC SIGNATURES OF MALIGNANCY

Neuro-oncology (Charlottesville, Va.), 2022-11, Vol.24 (Supplement_7), p.vii123-vii123

2022

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TMIC-30. COMPUTATIONAL CHARACTERIZATION OF SUPPRESSIVE IMMUNE MICROENVIRONMENTS IN GLIOBLASTOMA

Neuro-oncology (Charlottesville, Va.), 2018-11, Vol.20 (suppl_6), p.vi262-vi262

2018

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Abstract 4720: Chromatin conformation alterations in prostate cancer progression and formation of castration resistance

Cancer research (Chicago, Ill.), 2023-04, Vol.83 (7_Supplement), p.4720-4720

2023

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Abstract LB-096: Chromatin alterations in human prostate cancer

Cancer research (Chicago, Ill.), 2019-07, Vol.79 (13_Supplement), p.LB-096-LB-096

2019

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FURIN regulates cytotoxic T‐lymphocyte effector function and memory cell transition in mice

European journal of immunology, 2023-06, Vol.53 (6), p.e2250246-n/a

2023

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Abstract 4148: Different immune cell responses are associated with glioblastoma subclassification and typical genetic alterations

Cancer research (Chicago, Ill.), 2016-07, Vol.76 (14_Supplement), p.4148-4148

2016

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The transcription factor network of E. coli steers global responses to shifts in RNAP concentration

Nucleic acids research, 2022-07, Vol.50 (12), p.6801-6819

2022

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Abstract A052: Chromatin conformational changes in prostate cancer progression

Cancer research (Chicago, Ill.), 2023-06, Vol.83 (11_Supplement), p.A052-A052

2023

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Adaptive and non-adaptive gene expression responses in prostate cancer during androgen deprivation

Functional human cell-based vascularised cardiac tissue model for biomedical research and testing

AR and ERG drive the expression of prostate cancer specific long noncoding RNAs

Previously reported CCDC26 risk variant and novel germline variants in GALNT13, AR, and MYO10 associated with familial glioma in Finland

Clinical association analysis of ependymomas and pilocytic astrocytomas reveals elevated FGFR3 and FGFR1 expression in aggressive ependymomas

Balance between noise and information flow maximizes set complexity of network dynamics

Measures for information propagation in Boolean networks

Information-theoretic analysis of the dynamics of an executable biological model

Combined Longitudinal Clinical and Autopsy Phenomic Assessment in Lethal Metastatic Prostate Cancer: Recommendations for Advancing Precision Medicine

Computational Characterization of Suppressive Immune Microenvironments in Glioblastoma

Nonmalignant AR-positive prostate epithelial cells and cancer cells respond differently to androgen

Unsupervised clustering of brain tumor leukocytes to reveal atypical lymphoid cell subsets

Abstract LB-173: DNA methylation analysis reveals epigenetic regulation of neural differentiation in AT/RTs

Strong FGFR3 staining is a marker for FGFR3 fusions in diffuse gliomas

Proprotein convertase subtilisin/kexin type 9 regulates the production of acute‐phase reactants from the liver

Identification of long noncoding RNAs with aberrant expression in prostate cancer metastases

Spatial cumulant models enable spatially informed treatment strategies and analysis of local interactions in cancer systems

EPCO-34. INTEGRATIVE DNA METHYLATION ANALYSIS OF PEDIATRIC BRAIN TUMORS REVEALS TUMOR TYPE-SPECIFIC DEVELOPMENTAL TRAJECTORIES AND EPIGENETIC SIGNATURES OF MALIGNANCY

TMIC-30. COMPUTATIONAL CHARACTERIZATION OF SUPPRESSIVE IMMUNE MICROENVIRONMENTS IN GLIOBLASTOMA

Abstract 4720: Chromatin conformation alterations in prostate cancer progression and formation of castration resistance

Abstract LB-096: Chromatin alterations in human prostate cancer

FURIN regulates cytotoxic T‐lymphocyte effector function and memory cell transition in mice

Abstract 4148: Different immune cell responses are associated with glioblastoma subclassification and typical genetic alterations

The transcription factor network of E. coli steers global responses to shifts in RNAP concentration

Abstract A052: Chromatin conformational changes in prostate cancer progression

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