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Matrix metalloproteinase (MMP)-9: A proximal biomarker for cardiac remodeling and a distal biomarker for inflammation

Pharmacology & therapeutics (Oxford), 2013-07, Vol.139 (1), p.32-40

2013

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Multimodal Identification of Molecular Factors Linked to Severe Diabetic Foot Ulcers Using Artificial Intelligence

International journal of molecular sciences, 2024-10, Vol.25 (19), p.10686

2024

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Deep learning tackles single-cell analysis—a survey of deep learning for scRNA-seq analysis

Briefings in bioinformatics, 2022-01, Vol.23 (1)

2022

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Matrix Metalloproteinase-28 Deletion Exacerbates Cardiac Dysfunction and Rupture After Myocardial Infarction in Mice by Inhibiting M2 Macrophage Activation

Circulation research, 2013-02, Vol.112 (4), p.675-688

2013

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Deriving a Boolean dynamics to reveal macrophage activation with in vitro temporal cytokine expression profiles

BMC bioinformatics, 2019-12, Vol.20 (1), p.725-725, Article 725

2019

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A Novel Collagen Matricryptin Reduces Left Ventricular Dilation Post-Myocardial Infarction by Promoting Scar Formation and Angiogenesis

Journal of the American College of Cardiology, 2015-09, Vol.66 (12), p.1364-1374

2015

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Classification of Cancer Types Using Graph Convolutional Neural Networks

Frontiers in physics, 2020-06, Vol.8

2020

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Transformer for Gene Expression Modeling (T-GEM): An Interpretable Deep Learning Model for Gene Expression-Based Phenotype Predictions

Cancers, 2022-09, Vol.14 (19), p.4763

2022

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An Explainable Intelligent Framework for Anomaly Mitigation in Cyber-Physical Inverter-Based Systems

IEEE access, 2023, Vol.11, p.65382-65394

2023

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Reduced BDNF attenuates inflammation and angiogenesis to improve survival and cardiac function following myocardial infarction in mice

American journal of physiology. Heart and circulatory physiology, 2013-12, Vol.305 (12), p.H1830-H1842

2013

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Cardiac aging is initiated by matrix metalloproteinase-9-mediated endothelial dysfunction

American journal of physiology. Heart and circulatory physiology, 2014-05, Vol.306 (10), p.H1398-H1407

2014

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Mathematical modeling and stability analysis of macrophage activation in left ventricular remodeling post-myocardial infarction

BMC genomics, 2012, Vol.13 Suppl 6 (Suppl 6), p.S21-S21, Article S21

2012

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P. gingivalis lipopolysaccharide intensifies inflammation post-myocardial infarction through matrix metalloproteinase-9

Journal of molecular and cellular cardiology, 2014-11, Vol.76, p.218-226

2014

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Transgenic overexpression of matrix metalloproteinase-9 in macrophages attenuates the inflammatory response and improves left ventricular function post-myocardial infarction

Journal of molecular and cellular cardiology, 2012-11, Vol.53 (5), p.599-608

2012

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SPARC mediates early extracellular matrix remodeling following myocardial infarction

American journal of physiology. Heart and circulatory physiology, 2011-08, Vol.301 (2), p.H497-H505

2011

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Multi-analyte profiling reveals matrix metalloproteinase-9 and monocyte chemotactic protein-1 as plasma biomarkers of cardiac aging

Circulation. Cardiovascular genetics, 2011-08, Vol.4 (4), p.455-462

2011

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Prediction and interpretation of cancer survival using graph convolution neural networks

Methods (San Diego, Calif.), 2021-08, Vol.192, p.120-130

2021

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Transcriptional profiles of non-neuronal and immune cells in mouse trigeminal ganglia

Frontiers in pain research (Lausanne, Switzerland), 2023, Vol.4, p.1274811-1274811

2023

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Using systems biology approaches to understand cardiac inflammation and extracellular matrix remodeling in the setting of myocardial infarction

Wiley interdisciplinary reviews. Mechanisms of disease, 2014-01, Vol.6 (1), p.77-91

2014

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Matrix Metalloproteinase-28 Deletion Amplifies Inflammatory and Extracellular Matrix Responses to Cardiac Aging

Microscopy and microanalysis, 2012-02, Vol.18 (1), p.81-90

2012

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Combining experimental and mathematical modeling to reveal mechanisms of macrophage-dependent left ventricular remodeling

BMC systems biology, 2011-05, Vol.5 (74), p.60-60

2011

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Characterization of the complete chloroplast genome of Allium prattii

Mitochondrial DNA. Part B. Resources, 2018-02, Vol.3 (1), p.153-154

2018

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The complete chloroplast genome of a wild onion species Allium monanthum (Alliaceae)

Mitochondrial DNA. Part B. Resources, 2019-01, Vol.4 (1), p.854-855

2019

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Integrative computational and experimental approaches to establish a post-myocardial infarction knowledge map

PLoS computational biology, 2014-03, Vol.10 (3), p.e1003472-e1003472

2014

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Transformative Impact of Proteomics on Cardiovascular Health and Disease: A Scientific Statement From the American Heart Association

Circulation (New York, N.Y.), 2015-09, Vol.132 (9), p.852-872

2015

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Matrix metalloproteinase (MMP)-9: A proximal biomarker for cardiac remodeling and a distal biomarker for inflammation

Multimodal Identification of Molecular Factors Linked to Severe Diabetic Foot Ulcers Using Artificial Intelligence

Deep learning tackles single-cell analysis—a survey of deep learning for scRNA-seq analysis

Matrix Metalloproteinase-28 Deletion Exacerbates Cardiac Dysfunction and Rupture After Myocardial Infarction in Mice by Inhibiting M2 Macrophage Activation

Deriving a Boolean dynamics to reveal macrophage activation with in vitro temporal cytokine expression profiles

A Novel Collagen Matricryptin Reduces Left Ventricular Dilation Post-Myocardial Infarction by Promoting Scar Formation and Angiogenesis

Classification of Cancer Types Using Graph Convolutional Neural Networks

Transformer for Gene Expression Modeling (T-GEM): An Interpretable Deep Learning Model for Gene Expression-Based Phenotype Predictions

An Explainable Intelligent Framework for Anomaly Mitigation in Cyber-Physical Inverter-Based Systems

Reduced BDNF attenuates inflammation and angiogenesis to improve survival and cardiac function following myocardial infarction in mice

Cardiac aging is initiated by matrix metalloproteinase-9-mediated endothelial dysfunction

Mathematical modeling and stability analysis of macrophage activation in left ventricular remodeling post-myocardial infarction

P. gingivalis lipopolysaccharide intensifies inflammation post-myocardial infarction through matrix metalloproteinase-9

Transgenic overexpression of matrix metalloproteinase-9 in macrophages attenuates the inflammatory response and improves left ventricular function post-myocardial infarction

SPARC mediates early extracellular matrix remodeling following myocardial infarction

Multi-analyte profiling reveals matrix metalloproteinase-9 and monocyte chemotactic protein-1 as plasma biomarkers of cardiac aging

Prediction and interpretation of cancer survival using graph convolution neural networks

Transcriptional profiles of non-neuronal and immune cells in mouse trigeminal ganglia

Using systems biology approaches to understand cardiac inflammation and extracellular matrix remodeling in the setting of myocardial infarction

Matrix Metalloproteinase-28 Deletion Amplifies Inflammatory and Extracellular Matrix Responses to Cardiac Aging

Combining experimental and mathematical modeling to reveal mechanisms of macrophage-dependent left ventricular remodeling

Characterization of the complete chloroplast genome of Allium prattii

The complete chloroplast genome of a wild onion species Allium monanthum (Alliaceae)

Integrative computational and experimental approaches to establish a post-myocardial infarction knowledge map

Transformative Impact of Proteomics on Cardiovascular Health and Disease: A Scientific Statement From the American Heart Association

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