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Genome-wide identification of transcription start sites, promoters and transcription factor binding sites in E. coli

PloS one, 2009-10, Vol.4 (10), p.e7526-e7526

2009

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Shining light on the transcriptome: Molecular regulatory networks leading to a fast-growth phenotype by continuous light in an environmentally sensitive teleost (Atherinopsidae)

Journal of photochemistry and photobiology. B, Biology, 2022-10, Vol.235, p.112550-112550, Article 112550

2022

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RegulonDB (version 5.0): Escherichia coli K-12 transcriptional regulatory network, operon organization, and growth conditions

Nucleic acids research, 2006-01, Vol.34 (Database issue), p.D394

2006

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Integrative Differential Expression Analysis for Multiple EXperiments (IDEAMEX): A Web Server Tool for Integrated RNA-Seq Data Analysis

Frontiers in genetics, 2019-03, Vol.10, p.279-279

2019

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RegulonDB version 7.0: transcriptional regulation of Escherichia coli K-12 integrated within genetic sensory response units (Gensor Units)

Nucleic acids research, 2011-01, Vol.39 (Database issue), p.D98

2011

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RegulonDB v8.0: omics data sets, evolutionary conservation, regulatory phrases, cross-validated gold standards and more

Nucleic acids research, 2013-01, Vol.41 (Database issue), p.D203

2013

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High-throughput transcriptome sequencing and comparative analysis of Escherichia coli and Schizosaccharomyces pombe in respiratory and fermentative growth

PloS one, 2021-03, Vol.16 (3), p.e0248513-e0248513

2021

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partitioned Rhizobium etli genome: Genetic and metabolic redundancy in seven interacting replicons

Proceedings of the National Academy of Sciences - PNAS, 2006-03, Vol.103 (10), p.3834-3839

2006

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Comparative and functional genomics of the protozoan parasite Babesia divergens highlighting the invasion and egress processes

PLoS neglected tropical diseases, 2019-08, Vol.13 (8), p.e0007680-e0007680

2019

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Functional categorization of de novo transcriptome assembly of Vanilla planifolia Jacks. potentially points to a translational regulation during early stages of infection by Fusarium oxysporum f. sp. vanillae

BMC genomics, 2019-11, Vol.20 (1), p.826-826, Article 826

2019

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Transcriptome analysis of the spider Phonotimpus pennimani reveals novel toxin transcripts

The journal of venomous animals and toxins including tropical diseases, 2023, Vol.29, p.e20220031-e20220031

2023

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Argonaute5 and its associated small RNAs modulate the transcriptional response during the rhizobia-Phaseolus vulgaris symbiosis

Frontiers in plant science, 2022-11, Vol.13, p.1034419-1034419

2022

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Assembly and Analysis of Haemonchus contortus Transcriptome as a Tool for the Knowledge of Ivermectin Resistance Mechanisms

Pathogens (Basel), 2023-03, Vol.12 (3), p.499

2023

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RegulonDB (version 4.0): transcriptional regulation, operon organization and growth conditions in Escherichia coli K-12

Nucleic acids research, 2004-01, Vol.32 (Database issue), p.D303

2004

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Proteomic analysis revealed proteins induced upon Azotobacter vinelandii encystment

Journal of proteomics, 2018-06, Vol.181, p.47-59

2018

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Bioinformatics Resources for the Study of Gene Regulation in Bacteria

Journal of bacteriology, 2009-01, Vol.191 (1), p.23-31

2009

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Whole-exome sequencing in maya indigenous families: variant in PPP1R3A is associated with type 2 diabetes

Molecular genetics and genomics : MGG, 2018-10, Vol.293 (5), p.1205-1216

2018

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Global transcriptional start site mapping in Geobacter sulfurreducens during growth with two different electron acceptors

FEMS microbiology letters, 2016-09, Vol.363 (17), p.fnw175

2016

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Corrigendum: the BioPAX community standard for pathway data sharing

Nature biotechnology, 2012-04, Vol.30 (4), p.365

2012

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The BioPAX community standard for pathway data sharing

Nature biotechnology, 2010-12, Vol.28 (12), p.1308-1308

2010

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Environmental conditions and transcriptional regulation in Escherichia coli: a physiological integrative approach

Biotechnology and bioengineering, 2003-12, Vol.84 (7), p.743-749

2003

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Environmental conditions and transcriptional regulation in Escherichia coli: A physiological integrative approach: Systems approaches to biotechnology: systems biotechnology in the making

Biotechnology and bioengineering, 2003, Vol.84 (7), p.743-749

2003

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Assembly and Analysis of IHaemonchus contortus/I Transcriptome as a Tool for the Knowledge of Ivermectin Resistance Mechanisms

Pathogens (Basel), 2023-03, Vol.12 (3)

2023

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R-Ladies: solidaridad y compromiso de una comunidad de profesionistas

Revista digital universitaria, 2021-01, Vol.22 (1)

Jiménez Jacinto, Verónica

2021

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Genome-wide identification of transcription start sites, promoters and transcription factor binding sites in E. coli

Shining light on the transcriptome: Molecular regulatory networks leading to a fast-growth phenotype by continuous light in an environmentally sensitive teleost (Atherinopsidae)

RegulonDB (version 5.0): Escherichia coli K-12 transcriptional regulatory network, operon organization, and growth conditions

Integrative Differential Expression Analysis for Multiple EXperiments (IDEAMEX): A Web Server Tool for Integrated RNA-Seq Data Analysis

RegulonDB version 7.0: transcriptional regulation of Escherichia coli K-12 integrated within genetic sensory response units (Gensor Units)

RegulonDB v8.0: omics data sets, evolutionary conservation, regulatory phrases, cross-validated gold standards and more

High-throughput transcriptome sequencing and comparative analysis of Escherichia coli and Schizosaccharomyces pombe in respiratory and fermentative growth

partitioned Rhizobium etli genome: Genetic and metabolic redundancy in seven interacting replicons

Comparative and functional genomics of the protozoan parasite Babesia divergens highlighting the invasion and egress processes

Functional categorization of de novo transcriptome assembly of Vanilla planifolia Jacks. potentially points to a translational regulation during early stages of infection by Fusarium oxysporum f. sp. vanillae

Transcriptome analysis of the spider Phonotimpus pennimani reveals novel toxin transcripts

Argonaute5 and its associated small RNAs modulate the transcriptional response during the rhizobia-Phaseolus vulgaris symbiosis

Assembly and Analysis of Haemonchus contortus Transcriptome as a Tool for the Knowledge of Ivermectin Resistance Mechanisms

RegulonDB (version 4.0): transcriptional regulation, operon organization and growth conditions in Escherichia coli K-12

RegulonDB (version 6.0): gene regulation model of Escherichia coli K-12 beyond transcription, active (experimental) annotated promoters and Textpresso navigation

Proteomic analysis revealed proteins induced upon Azotobacter vinelandii encystment

Bioinformatics Resources for the Study of Gene Regulation in Bacteria

Whole-exome sequencing in maya indigenous families: variant in PPP1R3A is associated with type 2 diabetes

Global transcriptional start site mapping in Geobacter sulfurreducens during growth with two different electron acceptors

Corrigendum: the BioPAX community standard for pathway data sharing

The BioPAX community standard for pathway data sharing

Environmental conditions and transcriptional regulation in Escherichia coli: a physiological integrative approach

Environmental conditions and transcriptional regulation in Escherichia coli: A physiological integrative approach: Systems approaches to biotechnology: systems biotechnology in the making

Assembly and Analysis of IHaemonchus contortus/I Transcriptome as a Tool for the Knowledge of Ivermectin Resistance Mechanisms

R-Ladies: solidaridad y compromiso de una comunidad de profesionistas

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