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scPred: accurate supervised method for cell-type classification from single-cell RNA-seq data

Genome Biology, 2019-12, Vol.20 (1), p.264-17, Article 264

2019

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Genomic Instability in Cancer: Teetering on the Limit of Tolerance

Cancer research (Chicago, Ill.), 2017-05, Vol.77 (9), p.2179-2185

2017

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Single-Cell Genomic Characterization Reveals the Cellular Reprogramming of the Gastric Tumor Microenvironment

Clinical cancer research, 2020-06, Vol.26 (11), p.2640-2653

2020

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Pan-cancer analysis of the extent and consequences of intratumor heterogeneity

Nature medicine, 2016-01, Vol.22 (1), p.105-113

2016

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Single-cell analysis can define distinct evolution of tumor sites in follicular lymphoma

Blood, 2021-05, Vol.137 (21), p.2869-2880

2021

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Oncogenic transformation of diverse gastrointestinal tissues in primary organoid culture

Nature medicine, 2014-07, Vol.20 (7), p.769-777

2014

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Short Tandem Repeat DNA Profiling Using Perylene-Oligonucleotide Fluorescence Assay

Analytical chemistry (Washington), 2023-05, Vol.95 (20), p.7872-7879

2023

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KmerKeys: a web resource for searching indexed genome assemblies and variants

Nucleic acids research, 2022-07, Vol.50 (W1), p.W448

2022

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Performance comparison of whole-genome sequencing platforms

Nature biotechnology, 2012-01, Vol.30 (1), p.78-82

2012

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Magnetic DNA random access memory with nanopore readouts and exponentially-scaled combinatorial addressing

Scientific reports, 2023-05, Vol.13 (1), p.8514-8514, Article 8514

2023

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Niche-DE: niche-differential gene expression analysis in spatial transcriptomics data identifies context-dependent cell-cell interactions

Genome Biology, 2024-01, Vol.25 (1), p.14-33, Article 14

2024

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Single-cell characterization of CRISPR-modified transcript isoforms with nanopore sequencing

Genome Biology, 2021-12, Vol.22 (1), p.331-331, Article 331

2021

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Ultrasensitive detection of rare mutations using next-generation targeted resequencing

Nucleic acids research, 2012-01, Vol.40 (1), p.e2

2012

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CRISPR-Cas9-targeted fragmentation and selective sequencing enable massively parallel microsatellite analysis

Nature communications, 2017-02, Vol.8 (1), p.14291-14291, Article 14291

2017

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Single-molecule methylation profiles of cell-free DNA in cancer with nanopore sequencing

Genome medicine, 2023-05, Vol.15 (1), p.33-33, Article 33

2023

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Strain-resolved microbiome sequencing reveals mobile elements that drive bacterial competition on a clinical timescale

Genome medicine, 2020-05, Vol.12 (1), p.50-50, Article 50

2020

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Single molecule counting and assessment of random molecular tagging errors with transposable giga-scale error-correcting barcodes

BMC genomics, 2017-09, Vol.18 (1), p.745-745, Article 745

2017

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GITR and TIGIT immunotherapy provokes divergent multicellular responses in the tumor microenvironment of gastrointestinal cancers

Genome medicine, 2023-11, Vol.15 (1), p.1-25, Article 100

2023

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Linked read sequencing resolves complex genomic rearrangements in gastric cancer metastases

Genome medicine, 2017-06, Vol.9 (1), p.57-57, Article 57

2017

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Tumor-associated microbiome features of metastatic colorectal cancer and clinical implications

Frontiers in oncology, 2024-01, Vol.13, p.1310054-1310054

2024

Volltextzugriff (PDF)

Profiling SARS-CoV-2 mutation fingerprints that range from the viral pangenome to individual infection quasispecies

Genome medicine, 2021-04, Vol.13 (1), p.62-62, Article 62

2021

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Germline variants of ATG7 in familial cholangiocarcinoma alter autophagy and p62

Scientific reports, 2022-06, Vol.12 (1), p.10333-10333, Article 10333

2022

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High Sensitivity Detection and Quantitation of DNA Copy Number and Single Nucleotide Variants with Single Color Droplet Digital PCR

Analytical chemistry (Washington), 2014-03, Vol.86 (5), p.2618-2624

2014

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Profiling diverse sequence tandem repeats in colorectal cancer reveals co-occurrence of microsatellite and chromosomal instability involving Chromosome 8

Genome medicine, 2021-09, Vol.13 (1), p.145-145, Article 145

2021

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A deep learning model for molecular label transfer that enables cancer cell identification from histopathology images

NPJ precision oncology, 2022-03, Vol.6 (1), p.14-14, Article 14

2022

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scPred: accurate supervised method for cell-type classification from single-cell RNA-seq data

Genomic Instability in Cancer: Teetering on the Limit of Tolerance

Single-Cell Genomic Characterization Reveals the Cellular Reprogramming of the Gastric Tumor Microenvironment

Pan-cancer analysis of the extent and consequences of intratumor heterogeneity

Single-cell analysis can define distinct evolution of tumor sites in follicular lymphoma

Oncogenic transformation of diverse gastrointestinal tissues in primary organoid culture

Short Tandem Repeat DNA Profiling Using Perylene-Oligonucleotide Fluorescence Assay

KmerKeys: a web resource for searching indexed genome assemblies and variants

Performance comparison of whole-genome sequencing platforms

Magnetic DNA random access memory with nanopore readouts and exponentially-scaled combinatorial addressing

Niche-DE: niche-differential gene expression analysis in spatial transcriptomics data identifies context-dependent cell-cell interactions

Single-cell characterization of CRISPR-modified transcript isoforms with nanopore sequencing

Ultrasensitive detection of rare mutations using next-generation targeted resequencing

CRISPR-Cas9-targeted fragmentation and selective sequencing enable massively parallel microsatellite analysis

Single-molecule methylation profiles of cell-free DNA in cancer with nanopore sequencing

Strain-resolved microbiome sequencing reveals mobile elements that drive bacterial competition on a clinical timescale

Single molecule counting and assessment of random molecular tagging errors with transposable giga-scale error-correcting barcodes

GITR and TIGIT immunotherapy provokes divergent multicellular responses in the tumor microenvironment of gastrointestinal cancers

Linked read sequencing resolves complex genomic rearrangements in gastric cancer metastases

Tumor-associated microbiome features of metastatic colorectal cancer and clinical implications

Profiling SARS-CoV-2 mutation fingerprints that range from the viral pangenome to individual infection quasispecies

Germline variants of ATG7 in familial cholangiocarcinoma alter autophagy and p62

High Sensitivity Detection and Quantitation of DNA Copy Number and Single Nucleotide Variants with Single Color Droplet Digital PCR

Profiling diverse sequence tandem repeats in colorectal cancer reveals co-occurrence of microsatellite and chromosomal instability involving Chromosome 8

A deep learning model for molecular label transfer that enables cancer cell identification from histopathology images

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