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Interpreting the protein language using proteomics

Nature reviews. Molecular cell biology, 2006-06, Vol.7 (6), p.391-403

Jensen, Ole N

2006

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Modification-specific proteomics: Strategies for characterization of post-translational modifications using enrichment techniques

Proteomics (Weinheim), 2009-10, Vol.9 (20), p.4632-4641

2009

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FlashPack: Fast and Simple Preparation of Ultrahigh-performance Capillary Columns for LC-MS[S]

Molecular & cellular proteomics, 2019-02, Vol.18 (2), p.383-390

2019

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Two distinct modes for propagation of histone PTMs across the cell cycle

Genes & development, 2015-03, Vol.29 (6), p.585-590

2015

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EZH2 is a potential therapeutic target for H3K27M-mutant pediatric gliomas

Nature medicine, 2017-04, Vol.23 (4), p.483-492

2017

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Transcription Factor Cooperativity in Early Adipogenic Hotspots and Super-Enhancers

Cell reports (Cambridge), 2014-06, Vol.7 (5), p.1443-1455

2014

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Analytical strategies for phosphoproteomics

Proteomics (Weinheim), 2009-03, Vol.9 (6), p.1451-1468

2009

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Quantitative Assessment of In-solution Digestion Efficiency Identifies Optimal Protocols for Unbiased Protein Analysis

Molecular & cellular proteomics, 2013-10, Vol.12 (10), p.2992-3005

2013

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Organic matter processing by microbial communities throughout the Atlantic water column as revealed by metaproteomics

Proceedings of the National Academy of Sciences - PNAS, 2018-01, Vol.115 (3), p.E400-E408

2018

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The Tumor Suppressor CIC Directly Regulates MAPK Pathway Genes via Histone Deacetylation

Cancer research (Chicago, Ill.), 2018-08, Vol.78 (15), p.4114-4125

2018

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Phosphorylation of the FACT histone chaperone subunit SPT16 affects chromatin at RNA polymerase II transcriptional start sites in Arabidopsis

Nucleic acids research, 2022-05, Vol.50 (9), p.5014-5028

2022

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Proteomic analysis of post-translational modifications

Nature biotechnology, 2003-03, Vol.21 (3), p.255-261

2003

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FLASHIda enables intelligent data acquisition for top–down proteomics to boost proteoform identification counts

Nature communications, 2022-07, Vol.13 (1), p.4407-12, Article 4407

2022

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SIMAC (Sequential Elution from IMAC), a Phosphoproteomics Strategy for the Rapid Separation of Monophosphorylated from Multiply Phosphorylated Peptides

Molecular & cellular proteomics, 2008-04, Vol.7 (4), p.661-671

2008

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Proteomics in chromatin biology and epigenetics: Elucidation of post-translational modifications of histone proteins by mass spectrometry

Journal of proteomics, 2012-06, Vol.75 (12), p.3419-3433

2012

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Highly Selective Enrichment of Phosphorylated Peptides from Peptide Mixtures Using Titanium Dioxide Microcolumns

Molecular & cellular proteomics, 2005-07, Vol.4 (7), p.873-886

2005

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Quantitative Mass Spectrometry of Histones H3.2 and H3.3 in Suz12-deficient Mouse Embryonic Stem Cells Reveals Distinct, Dynamic Post-translational Modifications at Lys-27 and Lys-36

Molecular & cellular proteomics, 2010-05, Vol.9 (5), p.838-850

2010

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Highly selective enrichment of phosphorylated peptides using titanium dioxide

Nature protocols, 2006-11, Vol.1 (4), p.1929-1935

2006

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WAVE regulatory complex activation by cooperating GTPases Arf and Rac1

Proceedings of the National Academy of Sciences - PNAS, 2011-08, Vol.108 (35), p.14449-14454

2011

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A conserved, buried cysteine near the P-site is accessible to cysteine modifications and increases ROS stability in the P-type plasma membrane H+-ATPase

Biochemical journal, 2021-02, Vol.478 (3), p.619-632

2021

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On-Site Measurement of Fat and Protein Contents in Milk Using Mobile NMR Technology

Molecules (Basel, Switzerland), 2022-01, Vol.27 (3), p.583

2022

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Functional domain analysis of the Remorin protein LjSYMREM1 in Lotus japonicus

PloS one, 2012-01, Vol.7 (1), p.e30817-e30817

2012

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Utilizing the Banana S-Adenosyl-L-Homocysteine Hydrolase Allergen to Identify Cross-Reactive IgE in Ryegrass-, Latex-, and Kiwifruit-Allergic Individuals

International journal of molecular sciences, 2024-06, Vol.25 (11), p.5800

2024

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Distinct and diverse chromatin proteomes of ageing mouse organs reveal protein signatures that correlate with physiological functions

eLife, 2022-03, Vol.11

2022

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The human oral metaproteome reveals potential biomarkers for caries disease

Proteomics (Weinheim), 2015-10, Vol.15 (20), p.3497-3507

2015

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Interpreting the protein language using proteomics

Modification-specific proteomics: Strategies for characterization of post-translational modifications using enrichment techniques

FlashPack: Fast and Simple Preparation of Ultrahigh-performance Capillary Columns for LC-MS[S]

Two distinct modes for propagation of histone PTMs across the cell cycle

EZH2 is a potential therapeutic target for H3K27M-mutant pediatric gliomas

Transcription Factor Cooperativity in Early Adipogenic Hotspots and Super-Enhancers

Analytical strategies for phosphoproteomics

Quantitative Assessment of In-solution Digestion Efficiency Identifies Optimal Protocols for Unbiased Protein Analysis

Organic matter processing by microbial communities throughout the Atlantic water column as revealed by metaproteomics

The Tumor Suppressor CIC Directly Regulates MAPK Pathway Genes via Histone Deacetylation

Phosphorylation of the FACT histone chaperone subunit SPT16 affects chromatin at RNA polymerase II transcriptional start sites in Arabidopsis

Proteomic analysis of post-translational modifications

FLASHIda enables intelligent data acquisition for top–down proteomics to boost proteoform identification counts

SIMAC (Sequential Elution from IMAC), a Phosphoproteomics Strategy for the Rapid Separation of Monophosphorylated from Multiply Phosphorylated Peptides

Proteomics in chromatin biology and epigenetics: Elucidation of post-translational modifications of histone proteins by mass spectrometry

Highly Selective Enrichment of Phosphorylated Peptides from Peptide Mixtures Using Titanium Dioxide Microcolumns

Quantitative Mass Spectrometry of Histones H3.2 and H3.3 in Suz12-deficient Mouse Embryonic Stem Cells Reveals Distinct, Dynamic Post-translational Modifications at Lys-27 and Lys-36

Highly selective enrichment of phosphorylated peptides using titanium dioxide

WAVE regulatory complex activation by cooperating GTPases Arf and Rac1

A conserved, buried cysteine near the P-site is accessible to cysteine modifications and increases ROS stability in the P-type plasma membrane H+-ATPase

On-Site Measurement of Fat and Protein Contents in Milk Using Mobile NMR Technology

Functional domain analysis of the Remorin protein LjSYMREM1 in Lotus japonicus

Utilizing the Banana S-Adenosyl-L-Homocysteine Hydrolase Allergen to Identify Cross-Reactive IgE in Ryegrass-, Latex-, and Kiwifruit-Allergic Individuals

Distinct and diverse chromatin proteomes of ageing mouse organs reveal protein signatures that correlate with physiological functions

The human oral metaproteome reveals potential biomarkers for caries disease

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