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Tools and Strategies for Long-Read Sequencing and De Novo Assembly of Plant Genomes

Trends in plant science, 2019-08, Vol.24 (8), p.700-724

2019

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Twelve quick steps for genome assembly and annotation in the classroom

PLoS computational biology, 2020-11, Vol.16 (11), p.e1008325-e1008325

2020

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Transcriptomics of a giant freshwater prawn (Macrobrachium rosenbergii): de novo assembly, annotation and marker discovery

PloS one, 2011-12, Vol.6 (12), p.e27938-e27938

2011

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In-Plant Protection against Helicoverpa armigera by Production of Long hpRNA in Chloroplasts

Frontiers in plant science, 2016-09, Vol.7, p.1453-1453

2016

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Transcriptome profiling of olive flounder responses under acute and chronic heat stress

Genes & Genomics, 2021, 43(2), , pp.151-159

2021

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Optimizing Hybrid de Novo Transcriptome Assembly and Extending Genomic Resources for Giant Freshwater Prawns (Macrobrachium rosenbergii): The Identification of Genes and Markers Associated with Reproduction

International journal of molecular sciences, 2016-05, Vol.17 (5), p.690-690

2016

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First Draft Genome of a Mud Loach (Misgurnus mizolepis) in the Family Cobitidae

Frontiers in Marine Science, 2022-01, Vol.8

2022

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The Rise and Rise of Nicotiana benthamiana: A Plant for All Reasons

Annual review of phytopathology, 2018-08, Vol.56 (1), p.405-426

2018

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Molecular and functional characterizations of a Kunitz-type serine protease inhibitor FcKuSPI of the shrimp Fenneropenaeus chinensis

Fish & shellfish immunology, 2013-09, Vol.35 (3), p.1025-1029

2013

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Comparative Evaluation of Genome Assemblers from Long-Read Sequencing for Plants and Crops

Journal of agricultural and food chemistry, 2020-07, Vol.68 (29), p.7670-7677

2020

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Comparative genomic analysis of copepod humoral immunity genes with sex-biased expression in Labidocera rotunda

Journal of invertebrate pathology, 2024-11, Vol.207, p.108198, Article 108198

2024

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Long-read Pore-C shows the 3D structure of the cattle genome

Animal production science, 2023-04, Vol.63 (11), p.972-982

2023

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Guidelines for RNA-seq projects: applications and opportunities in non-model decapod crustacean species

Hydrobiologia, 2018-12, Vol.825 (1), p.5-27

2018

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Gravitropic Gene Expression Divergence Associated With Adaptation to Contrasting Environments in an Australian Wildflower

Molecular ecology, 2024-10, p.e17543

2024

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A multi-omic Nicotiana benthamiana resource for fundamental research and biotechnology

Nature plants, 2023-09, Vol.9 (9), p.1558-1571

2023

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Genes and growth performance in crustacean species: a review of relevant genomic studies in crustaceans and other taxa

Reviews in aquaculture, 2013-06, Vol.5 (2), p.77-110

2013

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a new Australian species in

Australian systematic botany, 2021-07, Vol.34 (5), p.477-484

2021

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Evaluation of potential candidate genes involved in salinity tolerance in striped catfish (Pangasianodon hypophthalmus) using an RNA-Seq approach

Marine genomics, 2016-02, Vol.25, p.75-88

2016

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A practical comparison of the next-generation sequencing platform and assemblers using yeast genome

Life science alliance, 2023-04, Vol.6 (4), p.e202201744

2023

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The extremophile Nicotiana benthamiana has traded viral defence for early vigour

Nature plants, 2015-11, Vol.1 (11), Article 15165

2015

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A Candidate Gene Association Study for Growth Performance in an Improved Giant Freshwater Prawn (Macrobrachium rosenbergii) Culture Line

Marine biotechnology (New York, N.Y.), 2014-04, Vol.16 (2), p.161-180

2014

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Transcriptomics of a Giant Freshwater Prawn

PloS one, 2011-12, Vol.6 (12), p.e27938

2011

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Development of Type I Genetic Markers from Expressed Sequence Tags in Highly Polymorphic Species

Marine biotechnology (New York, N.Y.), 2011-04, Vol.13 (2), p.127-132

2011

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Impacts of climatic factors on evolution of molecular diversity and the natural distribution of wild stocks of the giant freshwater prawn ( Macrobrachium rosenbergii )

Freshwater science, 2014-03, Vol.33 (1), p.217-231

2014

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Tools and Strategies for Long-Read Sequencing and De Novo Assembly of Plant Genomes

Twelve quick steps for genome assembly and annotation in the classroom

Transcriptomics of a giant freshwater prawn (Macrobrachium rosenbergii): de novo assembly, annotation and marker discovery

In-Plant Protection against Helicoverpa armigera by Production of Long hpRNA in Chloroplasts

Transcriptome profiling of olive flounder responses under acute and chronic heat stress

Optimizing Hybrid de Novo Transcriptome Assembly and Extending Genomic Resources for Giant Freshwater Prawns (Macrobrachium rosenbergii): The Identification of Genes and Markers Associated with Reproduction

First Draft Genome of a Mud Loach (Misgurnus mizolepis) in the Family Cobitidae

The Rise and Rise of Nicotiana benthamiana: A Plant for All Reasons

Molecular and functional characterizations of a Kunitz-type serine protease inhibitor FcKuSPI of the shrimp Fenneropenaeus chinensis

Comparative Evaluation of Genome Assemblers from Long-Read Sequencing for Plants and Crops

Comparative genomic analysis of copepod humoral immunity genes with sex-biased expression in Labidocera rotunda

Long-read Pore-C shows the 3D structure of the cattle genome

Guidelines for RNA-seq projects: applications and opportunities in non-model decapod crustacean species

Gravitropic Gene Expression Divergence Associated With Adaptation to Contrasting Environments in an Australian Wildflower

A multi-omic Nicotiana benthamiana resource for fundamental research and biotechnology

Genes and growth performance in crustacean species: a review of relevant genomic studies in crustaceans and other taxa

a new Australian species in

Evaluation of potential candidate genes involved in salinity tolerance in striped catfish (Pangasianodon hypophthalmus) using an RNA-Seq approach

A practical comparison of the next-generation sequencing platform and assemblers using yeast genome

The extremophile Nicotiana benthamiana has traded viral defence for early vigour

Author Correction: A multi-omic Nicotiana benthamiana resource for fundamental research and biotechnology

A Candidate Gene Association Study for Growth Performance in an Improved Giant Freshwater Prawn (Macrobrachium rosenbergii) Culture Line

Transcriptomics of a Giant Freshwater Prawn

Development of Type I Genetic Markers from Expressed Sequence Tags in Highly Polymorphic Species

Impacts of climatic factors on evolution of molecular diversity and the natural distribution of wild stocks of the giant freshwater prawn ( Macrobrachium rosenbergii )

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