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Large-scale identification of social and behavioral determinants of health from clinical notes: comparison of Latent Semantic Indexing and Generative Pretrained Transformer (GPT) models

BMC medical informatics and decision making, 2024-10, Vol.24 (1), p.296-12, Article 296

2024

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Risk factors associated with glycated hemoglobin A1c trajectories progressing to type 2 diabetes

Annals of medicine (Helsinki), 2023-12, Vol.55 (1), p.371-378

2023

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Predicting survey responses: how and why semantics shape survey statistics on organizational behaviour

PloS one, 2014-09, Vol.9 (9), p.e106361-e106361

2014

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Functionally enigmatic genes: a case study of the brain ignorome

PloS one, 2014-02, Vol.9 (2), p.e88889-e88889

2014

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Impact of ketamine on learning and memory function, neuronal apoptosis and its potential association with miR-214 and PTEN in adolescent rats

PloS one, 2014-06, Vol.9 (6), p.e99855

2014

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Intermittent hypoxia after transient focal ischemia induces hippocampal neurogenesis and c-Fos expression and reverses spatial memory deficits in rats

PloS one, 2011-08, Vol.6 (8), p.e24001-e24001

2011

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The transcription factor Mrr1p controls expression of the MDR1 efflux pump and mediates multidrug resistance in Candida albicans

PLoS pathogens, 2007-11, Vol.3 (11), p.e164

2007

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Evaluation of Sirtuin-3 probe quality and co-expressed genes using literature cohesion

BMC bioinformatics, 2019-03, Vol.20 (Suppl 2), p.104-104, Article 104

2019

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Proceedings of the 2019 MidSouth Computational Biology and Bioinformatics Society (MCBIOS) Conference

BMC bioinformatics, 2020-07, Vol.21 (Suppl 4), p.1-254, Article 254

2020

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Genome wide mapping reveals PDE4B as an IL-2 induced STAT5 target gene in activated human PBMCs and lymphoid cancer cells

PloS one, 2013-02, Vol.8 (2), p.e57326-e57326

2013

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Profiling animal toxicants by automatically mining public bioassay data: a big data approach for computational toxicology

PloS one, 2014-06, Vol.9 (6), p.e99863

2014

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Semi-Supervised Projective Non-Negative Matrix Factorization for Cancer Classification

PloS one, 2015-09, Vol.10 (9), p.e0138814-e0138814

2015

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MAP3K4 Controls the Chromatin Modifier HDAC6 during Trophoblast Stem Cell Epithelial-to-Mesenchymal Transition

Cell reports (Cambridge), 2017-03, Vol.18 (10), p.2387-2400

2017

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Paradoxical experiences of healthcare workers during COVID-19: a qualitative analysis of anonymous, web-based, audio narratives

International journal of qualitative studies on health and well-being, 2023-12, Vol.18 (1), p.2184034-2184034

2023

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The effects of cyclophosphamide on hippocampal cell proliferation and spatial working memory in rat

PloS one, 2011-06, Vol.6 (6), p.e21445

2011

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A Gain-of-Function Mutation in the Transcription Factor Upc2p Causes Upregulation of Ergosterol Biosynthesis Genes and Increased Fluconazole Resistance in a Clinical Candida albicans Isolate

Eukaryotic Cell, 2008-07, Vol.7 (7), p.1180-1190

2008

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Genome-Wide Expression Profiling of the Response to Azole, Polyene, Echinocandin, and Pyrimidine Antifungal Agents in Candida albicans

Antimicrobial Agents and Chemotherapy, 2005-06, Vol.49 (6), p.2226-2236

2005

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Editorial: AI and data science in drug development and public health: Highlights from the MCBIOS 2022 conference

Frontiers in big data, 2023-02, Vol.6, p.1156811-1156811

2023

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Dab2ip regulates neuronal migration and neurite outgrowth in the developing neocortex

PloS one, 2012-10, Vol.7 (10), p.e46592-e46592

2012

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Pdr1 regulates multidrug resistance in Candida glabrata: gene disruption and genome‐wide expression studies

Molecular microbiology, 2006-08, Vol.61 (3), p.704-722

2006

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The intracellular domain of sortilin interacts with amyloid precursor protein and regulates its lysosomal and lipid raft trafficking

PloS one, 2013-05, Vol.8 (5), p.e63049

2013

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Memphis FitKids: implementing a mobile-friendly web-based application to enhance parents' participation in improving child health

BMC public health, 2018-08, Vol.18 (1), p.1068-1068, Article 1068

2018

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ApoER2 and VLDLr are required for mediating reelin signalling pathway for normal migration and positioning of mesencephalic dopaminergic neurons

PloS one, 2013-08, Vol.8 (8), p.e71091-e71091

2013

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Large scale expression changes of genes related to neuronal signaling and developmental processes found in lateral septum of postpartum outbred mice

PloS one, 2013-05, Vol.8 (5), p.e63824-e63824

2013

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Three journal similarity metrics and their application to biomedical journals

PloS one, 2014-12, Vol.9 (12), p.e115681-e115681

2014

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Large-scale identification of social and behavioral determinants of health from clinical notes: comparison of Latent Semantic Indexing and Generative Pretrained Transformer (GPT) models

Risk factors associated with glycated hemoglobin A1c trajectories progressing to type 2 diabetes

Predicting survey responses: how and why semantics shape survey statistics on organizational behaviour

Functionally enigmatic genes: a case study of the brain ignorome

Impact of ketamine on learning and memory function, neuronal apoptosis and its potential association with miR-214 and PTEN in adolescent rats

Intermittent hypoxia after transient focal ischemia induces hippocampal neurogenesis and c-Fos expression and reverses spatial memory deficits in rats

The transcription factor Mrr1p controls expression of the MDR1 efflux pump and mediates multidrug resistance in Candida albicans

Evaluation of Sirtuin-3 probe quality and co-expressed genes using literature cohesion

Proceedings of the 2019 MidSouth Computational Biology and Bioinformatics Society (MCBIOS) Conference

Genome wide mapping reveals PDE4B as an IL-2 induced STAT5 target gene in activated human PBMCs and lymphoid cancer cells

Profiling animal toxicants by automatically mining public bioassay data: a big data approach for computational toxicology

Semi-Supervised Projective Non-Negative Matrix Factorization for Cancer Classification

MAP3K4 Controls the Chromatin Modifier HDAC6 during Trophoblast Stem Cell Epithelial-to-Mesenchymal Transition

Paradoxical experiences of healthcare workers during COVID-19: a qualitative analysis of anonymous, web-based, audio narratives

The effects of cyclophosphamide on hippocampal cell proliferation and spatial working memory in rat

A Gain-of-Function Mutation in the Transcription Factor Upc2p Causes Upregulation of Ergosterol Biosynthesis Genes and Increased Fluconazole Resistance in a Clinical Candida albicans Isolate

Genome-Wide Expression Profiling of the Response to Azole, Polyene, Echinocandin, and Pyrimidine Antifungal Agents in Candida albicans

Editorial: AI and data science in drug development and public health: Highlights from the MCBIOS 2022 conference

Dab2ip regulates neuronal migration and neurite outgrowth in the developing neocortex

Pdr1 regulates multidrug resistance in Candida glabrata: gene disruption and genome‐wide expression studies

The intracellular domain of sortilin interacts with amyloid precursor protein and regulates its lysosomal and lipid raft trafficking

Memphis FitKids: implementing a mobile-friendly web-based application to enhance parents' participation in improving child health

ApoER2 and VLDLr are required for mediating reelin signalling pathway for normal migration and positioning of mesencephalic dopaminergic neurons

Large scale expression changes of genes related to neuronal signaling and developmental processes found in lateral septum of postpartum outbred mice

Three journal similarity metrics and their application to biomedical journals

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