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Community recommendations on cryoEM data archiving and validation

IUCrJ, 2024-03, Vol.11 (Pt 2), p.140-151

2024

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Structural Studies of Bacteriophage Φ6 and Its Transformations during Its Life Cycle

Viruses, 2023-12, Vol.15 (12), p.2404

Heymann, J Bernard

2023

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Accounting for the Ewald Spheres in CryoEM Reconstructions and Their Relationship to 3D Fourier Transforms of Focal Series

Microscopy and microanalysis, 2023-07, Vol.29 (Supplement_1), p.1030-1031

2023

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Advances in understanding the molecular structure of retinoschisin while questions remain of biological function

Progress in retinal and eye research, 2023-07, Vol.95, p.101147-101147, Article 101147

2023

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The Ewald sphere/focus gradient does not limit the resolution of cryoEM reconstructions

Journal of structural biology. X, 2023-01, Vol.7, p.100083, Article 100083

Heymann, J. Bernard

2023

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The progressive spectral signal-to-noise ratio of cryo-electron micrograph movies as a tool to assess quality and radiation damage

Computer methods and programs in biomedicine, 2022-06, Vol.220, p.106799-106799, Article 106799

Heymann, J Bernard

2022

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Bsoft: Image Processing for Structural Biology

Bio-protocol, 2022-04, Vol.12 (8), p.e4393-e4393

Heymann, Bernard J

2022

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Cryo-Electron Tomography of the Herpesvirus Procapsid Reveals Interactions of the Portal with the Scaffold and a Shift on Maturation

mBio, 2021-03, Vol.12 (2)

2021

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FSC-Q: a CryoEM map-to-atomic model quality validation based on the local Fourier shell correlation

Nature communications, 2021-01, Vol.12 (1), p.42-42, Article 42

2021

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High resolution electron tomography and segmentation‐by‐modeling interpretation in Bsoft

Protein science, 2021-01, Vol.30 (1), p.44-59

Heymann, J. Bernard

2021

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The Mottled Capsid of the Salmonella Giant Phage SPN3US, a Likely Maturation Intermediate with a Novel Internal Shell

Viruses, 2020-08, Vol.12 (9), p.910

2020

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Protocols for Processing and Interpreting cryoEM Data Using Bsoft: A Case Study of the Retinal Adhesion Protein, Retinoschisin

Bio-protocol, 2020-01, Vol.10 (2), p.e3491-e3491

Heymann, J Bernard

2020

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Atomic structures of an entire contractile injection system in both the extended and contracted states

Nature microbiology, 2019-11, Vol.4 (11), p.1885-1894

2019

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Localization of the Herpesvirus Portal

Microscopy and microanalysis, 2019-08, Vol.25 (S2), p.1162-1163

2019

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Hunting for the Adhesion Molecule, Retinoschisin, in Retina using CEMOVIS

Microscopy and microanalysis, 2019-08, Vol.25 (S2), p.1308-1309

2019

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Carbon replicas reveal double stranded structure of tight junctions in phase-contrast electron microscopy

Communications biology, 2019-03, Vol.2 (1), p.98-98, Article 98

2019

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Cryo-EM of retinoschisin branched networks suggests an intercellular adhesive scaffold in the retina

The Journal of cell biology, 2019-03, Vol.218 (3), p.1027-1038

2019

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Single‐particle reconstruction statistics: a diagnostic tool in solving biomolecular structures by cryo‐EM

Acta crystallographica. Section F, Structural biology communications, 2019-01, Vol.75 (1), p.33-44

Heymann, J. Bernard

2019

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The first single particle analysis Map Challenge: A summary of the assessments

Journal of structural biology, 2018-11, Vol.204 (2), p.291-300

2018

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Map Challenge assessment: Fair comparison of single particle cryoEM reconstructions

Journal of structural biology, 2018-11, Vol.204 (2), p.360-367

Heymann, J. Bernard

2018

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Single particle reconstruction and validation using Bsoft for the map challenge

Journal of structural biology, 2018-10, Vol.204 (1), p.90-95

Heymann, J. Bernard

2018

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Using Reconstruction Statistics to Predict the Number of Images Required for Single Particle Analysis

Microscopy and microanalysis, 2018-08, Vol.24 (S1), p.1216-1217

Heymann, J. Bernard

2018

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Guidelines for using Bsoft for high resolution reconstruction and validation of biomolecular structures from electron micrographs

Protein science, 2018-01, Vol.27 (1), p.159-171

Heymann, J. Bernard

2018

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Tomographic Reconstruction from Electron Micrographs

Cellular Imaging, 2018, p.209-236

2018

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Galactose Induces Formation of Chains of the Retinal Adhesion Protein, Retinoschisin

Microscopy and microanalysis, 2017-07, Vol.23 (S1), p.1112-1113

2017

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Community recommendations on cryoEM data archiving and validation

Structural Studies of Bacteriophage Φ6 and Its Transformations during Its Life Cycle

Accounting for the Ewald Spheres in CryoEM Reconstructions and Their Relationship to 3D Fourier Transforms of Focal Series

Advances in understanding the molecular structure of retinoschisin while questions remain of biological function

The Ewald sphere/focus gradient does not limit the resolution of cryoEM reconstructions

The progressive spectral signal-to-noise ratio of cryo-electron micrograph movies as a tool to assess quality and radiation damage

Bsoft: Image Processing for Structural Biology

Cryo-Electron Tomography of the Herpesvirus Procapsid Reveals Interactions of the Portal with the Scaffold and a Shift on Maturation

FSC-Q: a CryoEM map-to-atomic model quality validation based on the local Fourier shell correlation

High resolution electron tomography and segmentation‐by‐modeling interpretation in Bsoft

The Mottled Capsid of the Salmonella Giant Phage SPN3US, a Likely Maturation Intermediate with a Novel Internal Shell

Protocols for Processing and Interpreting cryoEM Data Using Bsoft: A Case Study of the Retinal Adhesion Protein, Retinoschisin

Atomic structures of an entire contractile injection system in both the extended and contracted states

Localization of the Herpesvirus Portal

Hunting for the Adhesion Molecule, Retinoschisin, in Retina using CEMOVIS

Carbon replicas reveal double stranded structure of tight junctions in phase-contrast electron microscopy

Cryo-EM of retinoschisin branched networks suggests an intercellular adhesive scaffold in the retina

Single‐particle reconstruction statistics: a diagnostic tool in solving biomolecular structures by cryo‐EM

The first single particle analysis Map Challenge: A summary of the assessments

Map Challenge assessment: Fair comparison of single particle cryoEM reconstructions

Single particle reconstruction and validation using Bsoft for the map challenge

Using Reconstruction Statistics to Predict the Number of Images Required for Single Particle Analysis

Guidelines for using Bsoft for high resolution reconstruction and validation of biomolecular structures from electron micrographs

Tomographic Reconstruction from Electron Micrographs

Galactose Induces Formation of Chains of the Retinal Adhesion Protein, Retinoschisin

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