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Convergent gene losses illuminate metabolic and physiological changes in herbivores and carnivores

Proceedings of the National Academy of Sciences - PNAS, 2019-02, Vol.116 (8), p.3036-3041

2019

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A genomics approach reveals insights into the importance of gene losses for mammalian adaptations

Nature communications, 2018-03, Vol.9 (1), p.1215-9, Article 1215

2018

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Vision-related convergent gene losses reveal SERPINE3’s unknown role in the eye

eLife, 2022-06, Vol.11

2022

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Author Correction: A genomics approach reveals insights into the importance of gene losses for mammalian adaptations

Nature communications, 2019-12, Vol.10 (1), p.5707-1, Article 5707

2019

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Odontogenic ameloblast-associated (ODAM) is inactivated in toothless/enamelless placental mammals and toothed whales

BMC ecology and evolution, 2019-01, Vol.19 (1), p.31, Article 31

2019

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Associating transcription factors and conserved RNA structures with gene regulation in the human brain

Scientific reports, 2017-07, Vol.7 (1), p.5776-16, Article 5776

2017

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A new algorithm for integrated analysis of miRNA-mRNA interactions based on individual classification reveals insights into bladder cancer

PloS one, 2013-05, Vol.8 (5), p.e64543-e64543

2013

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A genome alignment of 120 mammals highlights ultraconserved element variability and placenta-associated enhancers

Gigascience, 2020-01, Vol.9 (1)

2020

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SCENIC+: single-cell multiomic inference of enhancers and gene regulatory networks

Nature methods, 2023-09, Vol.20 (9), p.1355-1367

2023

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Convergent vomeronasal system reduction in mammals coincides with convergent losses of calcium signalling and odorant-degrading genes

Molecular ecology, 2019-08, Vol.28 (16), p.3656-3668

2019

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Convergent Losses of TLR5 Suggest Altered Extracellular Flagellin Detection in Four Mammalian Lineages

Molecular biology and evolution, 2020-07, Vol.37 (7), p.1847-1854

2020

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Transition to an Aquatic Habitat Permitted the Repeated Loss of the Pleiotropic KLK8 Gene in Mammals

Genome biology and evolution, 2017-11, Vol.9 (11), p.3179-3188

2017

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RepeatFiller newly identifies megabases of aligning repetitive sequences and improves annotations of conserved non-exonic elements

Gigascience, 2019-11, Vol.8 (11)

2019

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Genes lost during the transition from land to water in cetaceans highlight genomic changes associated with aquatic adaptations

Science advances, 2019-09, Vol.5 (9), p.eaaw6671-eaaw6671

2019

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Convergent and lineage-specific genomic differences in limb regulatory elements in limbless reptile lineages

Cell reports (Cambridge), 2022-01, Vol.38 (3), p.110280-110280, Article 110280

2022

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Convergent vomeronasal system reduction in mammals coincides with convergent losses of calcium signalling and odorant‐degrading genes

Molecular ecology, 2019-08, Vol.28 (16), p.3656-3668

2019

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SuperTarget goes quantitative: update on drug-target interactions

Nucleic acids research, 2012-01, Vol.40 (Database issue), p.D1113

2012

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SuperTarget goes quantitative: update on drug-target interactions

Nucleic acids research, 2012-01, Vol.40 (D1), p.D1113-D1117

2012

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RNA secondary structure diagrams for very large molecules: RNAfdl

Bioinformatics, 2013-11, Vol.29 (22), p.2941-2942

2013

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Translational co-regulation of a ligand and inhibitor by a conserved RNA element

Nucleic acids research, 2018-01, Vol.46 (1), p.104-119

2018

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Gene losses in the common vampire bat illuminate molecular adaptations to blood feeding

Science advances, 2022-03, Vol.8 (12), p.eabm6494

2022

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Optimizing RNA structures by sequence extensions using RNAcop

Nucleic acids research, 2015-09, Vol.43 (17), p.8135-8145

2015

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A New Algorithm for Integrated Analysis of miRNA-mRNA Interactions Based on Individual Classification Reveals Insights into Bladder Cancer. e64543

PloS one, 2013-05, Vol.8 (5)

2013

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Peripheral lymphangiogenesis in mice depends on ectodermal connexin-26 (Gjb2)

Journal of cell science, 2011-08, Vol.124 (Pt 16), p.2806-2815

2011

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Peripheral lymphangiogenesis in mice depends on ectodermal connexin-26 (Gjb2)

Development (Cambridge), 2011-09, Vol.138 (17), p.e1706-e1706

2011

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Convergent gene losses illuminate metabolic and physiological changes in herbivores and carnivores

A genomics approach reveals insights into the importance of gene losses for mammalian adaptations

Vision-related convergent gene losses reveal SERPINE3’s unknown role in the eye

Author Correction: A genomics approach reveals insights into the importance of gene losses for mammalian adaptations

Odontogenic ameloblast-associated (ODAM) is inactivated in toothless/enamelless placental mammals and toothed whales

Associating transcription factors and conserved RNA structures with gene regulation in the human brain

A new algorithm for integrated analysis of miRNA-mRNA interactions based on individual classification reveals insights into bladder cancer

A genome alignment of 120 mammals highlights ultraconserved element variability and placenta-associated enhancers

SCENIC+: single-cell multiomic inference of enhancers and gene regulatory networks

Convergent vomeronasal system reduction in mammals coincides with convergent losses of calcium signalling and odorant-degrading genes

Convergent Losses of TLR5 Suggest Altered Extracellular Flagellin Detection in Four Mammalian Lineages

Transition to an Aquatic Habitat Permitted the Repeated Loss of the Pleiotropic KLK8 Gene in Mammals

RepeatFiller newly identifies megabases of aligning repetitive sequences and improves annotations of conserved non-exonic elements

Genes lost during the transition from land to water in cetaceans highlight genomic changes associated with aquatic adaptations

Convergent and lineage-specific genomic differences in limb regulatory elements in limbless reptile lineages

Convergent vomeronasal system reduction in mammals coincides with convergent losses of calcium signalling and odorant‐degrading genes

SuperTarget goes quantitative: update on drug-target interactions

SuperTarget goes quantitative: update on drug-target interactions

RNA secondary structure diagrams for very large molecules: RNAfdl

Translational co-regulation of a ligand and inhibitor by a conserved RNA element

Gene losses in the common vampire bat illuminate molecular adaptations to blood feeding

Optimizing RNA structures by sequence extensions using RNAcop

A New Algorithm for Integrated Analysis of miRNA-mRNA Interactions Based on Individual Classification Reveals Insights into Bladder Cancer. e64543

Peripheral lymphangiogenesis in mice depends on ectodermal connexin-26 (Gjb2)

Peripheral lymphangiogenesis in mice depends on ectodermal connexin-26 (Gjb2)

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