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A supermatrix analysis of genomic, morphological, and paleontological data from crown Cetacea

BMC evolutionary biology, 2011-04, Vol.11, p.112

2011

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Molecular evolution tracks macroevolutionary transitions in Cetacea

Trends in ecology & evolution (Amsterdam), 2014-06, Vol.29 (6), p.336-346

2014

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Concatenation versus coalescence versus “concatalescence”

Proceedings of the National Academy of Sciences - PNAS, 2013-03, Vol.110 (13), p.E1179-E1179

2013

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Impacts of the Cretaceous Terrestrial Revolution and KPg Extinction on Mammal Diversification

Science (American Association for the Advancement of Science), 2011-10, Vol.334 (6055), p.521-524

2011

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Relationships of Cetacea (Artiodactyla) among mammals: increased taxon sampling alters interpretations of key fossils and character evolution

PloS one, 2009-09, Vol.4 (9), p.e7062-e7062

2009

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Inactivation of the olfactory marker protein (OMP) gene in river dolphins and other odontocete cetaceans

Molecular phylogenetics and evolution, 2017-04, Vol.109, p.375-387

2017

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Macroevolutionary dynamics and historical biogeography of primate diversification inferred from a species supermatrix

PloS one, 2012-11, Vol.7 (11), p.e49521-e49521

2012

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ILS-Aware Analysis of Low-Homoplasy Retroelement Insertions: Inference of Species Trees and Introgression Using Quartets

The Journal of heredity, 2020-04, Vol.111 (2), p.147-168

2020

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Phylogenomic Coalescent Analyses of Avian Retroelements Infer Zero-Length Branches at the Base of Neoaves, Emergent Support for Controversial Clades, and Ancient Introgressive Hybridization in Afroaves

Genes, 2022-06, Vol.13 (7), p.1167

2022

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Rod monochromacy and the coevolution of cetacean retinal opsins

PLoS genetics, 2013-04, Vol.9 (4), p.e1003432-e1003432

2013

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Morphological and Molecular Evidence for a Stepwise Evolutionary Transition from Teeth to Baleen in Mysticete Whales

Systematic biology, 2008-02, Vol.57 (1), p.15-37

2008

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Evolutionary Models for the Diversification of Placental Mammals Across the KPg Boundary

Frontiers in genetics, 2019-11, Vol.10, p.1241-1241

2019

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Delimiting Coalescence Genes (C-Genes) in Phylogenomic Data Sets

Genes, 2018-02, Vol.9 (3), p.123

2018

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A phylogenetic hypothesis for Crocodylus (Crocodylia) based on mitochondrial DNA: Evidence for a trans-Atlantic voyage from Africa to the New World

Molecular phylogenetics and evolution, 2011-07, Vol.60 (1), p.183-191

2011

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Three Blind Moles: Molecular Evolutionary Insights on the Tempo and Mode of Convergent Eye Degeneration in Notoryctes typhlops (Southern Marsupial Mole) and Two Chrysochlorids (Golden Moles)

Genes, 2023-11, Vol.14 (11), p.2018

2023

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Inactivation of C4orf26 in toothless placental mammals

Molecular phylogenetics and evolution, 2016-02, Vol.95, p.34-45

2016

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Pseudogenization of the tooth gene enamelysin (MMP20) in the common ancestor of extant baleen whales

Proceedings of the Royal Society. B, Biological sciences, 2011-04, Vol.278 (1708), p.993

2011

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Extreme Diversity, Conservation, and Convergence of Spider Silk Fibroin Sequences

Science (American Association for the Advancement of Science), 2001-03, Vol.291 (5513), p.2603-2605

2001

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Hidden Likelihood Support in Genomic Data: Can Forty-Five Wrongs Make a Right?

Systematic biology, 2005-06, Vol.54 (3), p.483-492

2005

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Molecular Evidence for Relaxed Selection on the Enamel Genes of Toothed Whales (Odontoceti) with Degenerative Enamel Phenotypes

Genes, 2024-02, Vol.15 (2), p.228

2024

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How Many Genes Should a Systematist Sample? Conflicting Insights from a Phylogenomic Matrix Characterized by Replicated Incongruence

Systematic biology, 2007-04, Vol.56 (2), p.355-363

2007

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Resolution of a concatenation/coalescence kerfuffle: partitioned coalescence support and a robust family‐level tree for Mammalia

Cladistics, 2017-06, Vol.33 (3), p.295-332

2017

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Odontogenic ameloblast-associated (ODAM) is inactivated in toothless/enamelless placental mammals and toothed whales

BMC ecology and evolution, 2019-01, Vol.19 (1), p.31

2019

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Molecular decay of enamel matrix protein genes in turtles and other edentulous amniotes

BMC evolutionary biology, 2013-01, Vol.13, p.20

2013

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The Vestigial Olfactory Receptor Subgenome of Odontocete Whales: Phylogenetic Congruence between Gene-Tree Reconciliation and Supermatrix Methods

Systematic biology, 2008-08, Vol.57 (4), p.574-590

2008

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A supermatrix analysis of genomic, morphological, and paleontological data from crown Cetacea

Molecular evolution tracks macroevolutionary transitions in Cetacea

Concatenation versus coalescence versus “concatalescence”

Impacts of the Cretaceous Terrestrial Revolution and KPg Extinction on Mammal Diversification

Relationships of Cetacea (Artiodactyla) among mammals: increased taxon sampling alters interpretations of key fossils and character evolution

Inactivation of the olfactory marker protein (OMP) gene in river dolphins and other odontocete cetaceans

Macroevolutionary dynamics and historical biogeography of primate diversification inferred from a species supermatrix

ILS-Aware Analysis of Low-Homoplasy Retroelement Insertions: Inference of Species Trees and Introgression Using Quartets

Phylogenomic Coalescent Analyses of Avian Retroelements Infer Zero-Length Branches at the Base of Neoaves, Emergent Support for Controversial Clades, and Ancient Introgressive Hybridization in Afroaves

Rod monochromacy and the coevolution of cetacean retinal opsins

Morphological and Molecular Evidence for a Stepwise Evolutionary Transition from Teeth to Baleen in Mysticete Whales

Evolutionary Models for the Diversification of Placental Mammals Across the KPg Boundary

Delimiting Coalescence Genes (C-Genes) in Phylogenomic Data Sets

A phylogenetic hypothesis for Crocodylus (Crocodylia) based on mitochondrial DNA: Evidence for a trans-Atlantic voyage from Africa to the New World

Three Blind Moles: Molecular Evolutionary Insights on the Tempo and Mode of Convergent Eye Degeneration in Notoryctes typhlops (Southern Marsupial Mole) and Two Chrysochlorids (Golden Moles)

Inactivation of C4orf26 in toothless placental mammals

Pseudogenization of the tooth gene enamelysin (MMP20) in the common ancestor of extant baleen whales

Extreme Diversity, Conservation, and Convergence of Spider Silk Fibroin Sequences

Hidden Likelihood Support in Genomic Data: Can Forty-Five Wrongs Make a Right?

Molecular Evidence for Relaxed Selection on the Enamel Genes of Toothed Whales (Odontoceti) with Degenerative Enamel Phenotypes

How Many Genes Should a Systematist Sample? Conflicting Insights from a Phylogenomic Matrix Characterized by Replicated Incongruence

Resolution of a concatenation/coalescence kerfuffle: partitioned coalescence support and a robust family‐level tree for Mammalia

Odontogenic ameloblast-associated (ODAM) is inactivated in toothless/enamelless placental mammals and toothed whales

Molecular decay of enamel matrix protein genes in turtles and other edentulous amniotes

The Vestigial Olfactory Receptor Subgenome of Odontocete Whales: Phylogenetic Congruence between Gene-Tree Reconciliation and Supermatrix Methods

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