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Affinity-Purification Combined with Crosslinking Mass Spectrometry for Identification and Structural Modeling of Host-Pathogen Protein-Protein Complexes

Methods in molecular biology (Clifton, N.J.), 2023, Vol.2674, p.181

Happonen, Lotta J

2023

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Rapid determination of quaternary protein structures in complex biological samples

Nature communications, 2019-01, Vol.10 (1), p.192-192, Article 192

2019

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Snapshots of actin and tubulin folding inside the TRiC chaperonin

Nature structural & molecular biology, 2022-05, Vol.29 (5), p.420-429

2022

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Immunomodulating Enzymes from Streptococcus pyogenes -In Pathogenesis, as Biotechnological Tools, and as Biological Drugs

Microorganisms (Basel), 2024-01, Vol.12 (1), p.200

2024

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Interaction with the host: the role of fibronectin and extracellular matrix proteins in the adhesion of Gram-negative bacteria

Medical microbiology and immunology, 2020-06, Vol.209 (3), p.277-299

2020

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BtuB-Dependent Infection of the T5-like Yersinia Phage ϕR2-01

Viruses, 2021-10, Vol.13 (11), p.2171

2021

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The Structure of the NTPase That Powers DNA Packaging into Sulfolobus Turreted Icosahedral Virus 2

Journal of Virology, 2013-08, Vol.87 (15), p.8388-8398

2013

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Bacteriophages fEV-1 and fD1 Infect Yersinia pestis

Viruses, 2021-07, Vol.13 (7), p.1384

2021

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A quantitative Streptococcus pyogenes–human protein–protein interaction map reveals localization of opsonizing antibodies

Nature communications, 2019-06, Vol.10 (1), p.2727-15, Article 2727

2019

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Multienzyme deep learning models improve peptide de novo sequencing by mass spectrometry proteomics

PLoS computational biology, 2023-01, Vol.19 (1), p.e1010457

2023

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Spike-Dependent Opsonization Indicates Both Dose-Dependent Inhibition of Phagocytosis and That Non-Neutralizing Antibodies Can Confer Protection to SARS-CoV-2

Frontiers in immunology, 2022-01, Vol.12, p.808932

2022

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Structural determination of Streptococcus pyogenes M1 protein interactions with human immunoglobulin G using integrative structural biology

PLoS computational biology, 2021-01, Vol.17 (1), p.e1008169-e1008169

2021

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The hinge-engineered IgG1-IgG3 hybrid subclass IgGh47 potently enhances Fc-mediated function of anti-streptococcal and SARS-CoV-2 antibodies

Nature communications, 2024-04, Vol.15 (1), p.3600-3600, Article 3600

2024

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Structural proteomics, electron cryo-microscopy and structural modeling approaches in bacteria–human protein interactions

Medical microbiology and immunology, 2020-06, Vol.209 (3), p.265-275

2020

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In vivo Cross-Linking MS of the Complement System MAC Assembled on Live Gram-Positive Bacteria

Frontiers in genetics, 2021-01, Vol.11, p.612475-612475

2021

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Targeted Proteomics and Absolute Protein Quantification for the Construction of a Stoichiometric Host-Pathogen Surface Density Model

Molecular & cellular proteomics, 2017-04, Vol.16 (4), p.S29-S41

2017

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The Podovirus ϕ80-18 Targets the Pathogenic American Biotype 1B Strains of Yersinia enterocolitica

Frontiers in microbiology, 2020-06, Vol.11, p.1356-1356

2020

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A human monoclonal antibody bivalently binding two different epitopes in streptococcal M protein mediates immune function

EMBO molecular medicine, 2023-02, Vol.15 (2), p.e16208-n/a

2023

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Streptococcus pyogenes Forms Serotype- and Local Environment-Dependent Interspecies Protein Complexes

mSystems, 2021-10, Vol.6 (5), p.e0027121-e0027121

2021

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Interaction of Bartonella henselae with Fibronectin Represents the Molecular Basis for Adhesion to Host Cells

Microbiology spectrum, 2022-06, Vol.10 (3), p.e0059822-e0059822

2022

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Autophagy-mediated control of ribosome homeostasis in oncogene-induced senescence

Cell reports (Cambridge), 2023-11, Vol.42 (11), p.113381-113381, Article 113381

2023

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Characterization of the Genome, Proteome, and Structure of Yersiniophage ϕR1-37

Journal of Virology, 2012-12, Vol.86 (23), p.12625-12642

2012

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Host Defense Peptides LL-37 and Lactoferrin Trigger ET Release from Blood-Derived Circulating Monocytes

Biomedicines, 2022-02, Vol.10 (2), p.469

2022

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The intracellular helical bundle of human glucose transporter GLUT4 is important for complex formation with ASPL

FEBS open bio, 2023-11, Vol.13 (11), p.2094-2107

2023

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Streptococcal protein SIC activates monocytes and induces inflammation

iScience, 2021-04, Vol.24 (4), p.102339-102339, Article 102339

2021

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Affinity-Purification Combined with Crosslinking Mass Spectrometry for Identification and Structural Modeling of Host-Pathogen Protein-Protein Complexes

Rapid determination of quaternary protein structures in complex biological samples

Snapshots of actin and tubulin folding inside the TRiC chaperonin

Immunomodulating Enzymes from Streptococcus pyogenes -In Pathogenesis, as Biotechnological Tools, and as Biological Drugs

Interaction with the host: the role of fibronectin and extracellular matrix proteins in the adhesion of Gram-negative bacteria

BtuB-Dependent Infection of the T5-like Yersinia Phage ϕR2-01

The Structure of the NTPase That Powers DNA Packaging into Sulfolobus Turreted Icosahedral Virus 2

Bacteriophages fEV-1 and fD1 Infect Yersinia pestis

A quantitative Streptococcus pyogenes–human protein–protein interaction map reveals localization of opsonizing antibodies

Multienzyme deep learning models improve peptide de novo sequencing by mass spectrometry proteomics

Spike-Dependent Opsonization Indicates Both Dose-Dependent Inhibition of Phagocytosis and That Non-Neutralizing Antibodies Can Confer Protection to SARS-CoV-2

Structural determination of Streptococcus pyogenes M1 protein interactions with human immunoglobulin G using integrative structural biology

The hinge-engineered IgG1-IgG3 hybrid subclass IgGh47 potently enhances Fc-mediated function of anti-streptococcal and SARS-CoV-2 antibodies

Structural proteomics, electron cryo-microscopy and structural modeling approaches in bacteria–human protein interactions

In vivo Cross-Linking MS of the Complement System MAC Assembled on Live Gram-Positive Bacteria

Targeted Proteomics and Absolute Protein Quantification for the Construction of a Stoichiometric Host-Pathogen Surface Density Model

The Podovirus ϕ80-18 Targets the Pathogenic American Biotype 1B Strains of Yersinia enterocolitica

A human monoclonal antibody bivalently binding two different epitopes in streptococcal M protein mediates immune function

Streptococcus pyogenes Forms Serotype- and Local Environment-Dependent Interspecies Protein Complexes

Interaction of Bartonella henselae with Fibronectin Represents the Molecular Basis for Adhesion to Host Cells

Autophagy-mediated control of ribosome homeostasis in oncogene-induced senescence

Characterization of the Genome, Proteome, and Structure of Yersiniophage ϕR1-37

Host Defense Peptides LL-37 and Lactoferrin Trigger ET Release from Blood-Derived Circulating Monocytes

The intracellular helical bundle of human glucose transporter GLUT4 is important for complex formation with ASPL

Streptococcal protein SIC activates monocytes and induces inflammation

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