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Advances in de Novo Drug Design: From Conventional to Machine Learning Methods

International journal of molecular sciences, 2021-02, Vol.22 (4), p.1676

2021

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Differential DNA methylation in purified human blood cells: implications for cell lineage and studies on disease susceptibility

PloS one, 2012-07, Vol.7 (7), p.e41361-e41361

2012

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Microbe-host interplay in atopic dermatitis and psoriasis

Nature communications, 2019-10, Vol.10 (1), p.4703-15, Article 4703

2019

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CpGmotifs: a tool to discover DNA motifs associated to CpG methylation events

BMC bioinformatics, 2021-05, Vol.22 (1), p.278-278, Article 278

2021

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FunMappOne: a tool to hierarchically organize and visually navigate functional gene annotations in multiple experiments

BMC bioinformatics, 2019-02, Vol.20 (1), p.79-7, Article 79

2019

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IntEREst: intron-exon retention estimator

BMC bioinformatics, 2018-04, Vol.19 (1), p.130-130, Article 130

2018

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Clustering based approach for population level identification of condition-associated T-cell receptor β-chain CDR3 sequences

BMC bioinformatics, 2021-03, Vol.22 (1), p.159-159, Article 159

2021

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Drug repositioning: a machine-learning approach through data integration

Journal of cheminformatics, 2013-06, Vol.5 (1), p.30-30, Article 30

2013

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Inhalation and Oropharyngeal Aspiration Exposure to Rod-Like Carbon Nanotubes Induce Similar Airway Inflammation and Biological Responses in Mouse Lungs

ACS nano, 2017-01, Vol.11 (1), p.291-303

2017

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Acinetobacter species in the skin microbiota protect against allergic sensitization and inflammation

Journal of allergy and clinical immunology, 2014-12, Vol.134 (6), p.1301-1309.e11

2014

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IL-17/Th17 pathway is activated in acne lesions

PloS one, 2014-08, Vol.9 (8), p.e105238

2014

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Gain-of-function CEBPE mutation causes noncanonical autoinflammatory inflammasomopathy

Journal of allergy and clinical immunology, 2019-11, Vol.144 (5), p.1364-1376

2019

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Integrative network analysis suggests prioritised drugs for atopic dermatitis

Journal of translational medicine, 2024-01, Vol.22 (1), p.64-13, Article 64

2024

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OxLDL sensitizes platelets for increased formation of extracellular vesicles capable of finetuning macrophage gene expression

European journal of cell biology, 2023-06, Vol.102 (2), p.151311-151311, Article 151311

2023

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A robust and accurate method for feature selection and prioritization from multi-class OMICs data

PloS one, 2014-09, Vol.9 (9), p.e107801

2014

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NanoSolveIT Project: Driving nanoinformatics research to develop innovative and integrated tools for in silico nanosafety assessment

Computational and structural biotechnology journal, 2020-01, Vol.18, p.583-602

2020

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Gene expression in human NAFLD

American journal of physiology: Gastrointestinal and liver physiology, 2008-05, Vol.294 (5), p.G1281-G1287

2008

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Biomarkers of nanomaterials hazard from multi-layer data

Nature communications, 2022-07, Vol.13 (1), p.3798-3798, Article 3798

2022

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A Mitochondrial Ribosomal and RNA Decay Pathway Blocks Cell Proliferation

Current biology, 2013-03, Vol.23 (6), p.535-541

2013

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An integrated quantitative structure and mechanism of action-activity relationship model of human serum albumin binding

Journal of cheminformatics, 2019-06, Vol.11 (1), p.38-10, Article 38

2019

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A Multi‐Dimensional Approach to Map Disease Relationships Challenges Classical Disease Views

Advanced science, 2024-08, Vol.11 (30), p.e2401754-n/a

2024

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Proteomics and Transcriptomics Characterization of Bile Stress Response in Probiotic Lactobacillus rhamnosus GG

Molecular & cellular proteomics, 2011-02, Vol.10 (2), p.S1-S18

2011

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Expanding adverse outcome pathways towards one health models for nanosafety

Frontiers in toxicology, 2023-08, Vol.5, p.1176745-1176745

2023

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Human papillomavirus 16 E5 modulates the expression of host microRNAs

PloS one, 2011-07, Vol.6 (7), p.e21646

2011

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Advances in de Novo Drug Design: From Conventional to Machine Learning Methods

Differential DNA methylation in purified human blood cells: implications for cell lineage and studies on disease susceptibility

Microbe-host interplay in atopic dermatitis and psoriasis

CpGmotifs: a tool to discover DNA motifs associated to CpG methylation events

FunMappOne: a tool to hierarchically organize and visually navigate functional gene annotations in multiple experiments

Signals of pseudo-starvation unveil the amino acid transporter SLC7A11 as key determinant in the control of Treg cell proliferative potential

IntEREst: intron-exon retention estimator

Clustering based approach for population level identification of condition-associated T-cell receptor β-chain CDR3 sequences

Drug repositioning: a machine-learning approach through data integration

Inhalation and Oropharyngeal Aspiration Exposure to Rod-Like Carbon Nanotubes Induce Similar Airway Inflammation and Biological Responses in Mouse Lungs

Acinetobacter species in the skin microbiota protect against allergic sensitization and inflammation

IL-17/Th17 pathway is activated in acne lesions

Gain-of-function CEBPE mutation causes noncanonical autoinflammatory inflammasomopathy

Integrative network analysis suggests prioritised drugs for atopic dermatitis

OxLDL sensitizes platelets for increased formation of extracellular vesicles capable of finetuning macrophage gene expression

A robust and accurate method for feature selection and prioritization from multi-class OMICs data

NanoSolveIT Project: Driving nanoinformatics research to develop innovative and integrated tools for in silico nanosafety assessment

Gene expression in human NAFLD

Biomarkers of nanomaterials hazard from multi-layer data

A Mitochondrial Ribosomal and RNA Decay Pathway Blocks Cell Proliferation

An integrated quantitative structure and mechanism of action-activity relationship model of human serum albumin binding

A Multi‐Dimensional Approach to Map Disease Relationships Challenges Classical Disease Views

Proteomics and Transcriptomics Characterization of Bile Stress Response in Probiotic Lactobacillus rhamnosus GG

Expanding adverse outcome pathways towards one health models for nanosafety

Human papillomavirus 16 E5 modulates the expression of host microRNAs

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