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Updated Energy Budgets for Neural Computation in the Neocortex and Cerebellum

Journal of Cerebral Blood Flow & Metabolism, 2012-07, Vol.32 (7), p.1222-1232

2012

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NetPyNE, a tool for data-driven multiscale modeling of brain circuits

eLife, 2019-04, Vol.8

2019

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NeuroML: a language for describing data driven models of neurons and networks with a high degree of biological detail

PLoS computational biology, 2010-06, Vol.6 (6), p.e1000815-e1000815

2010

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The SONATA data format for efficient description of large-scale network models

PLoS computational biology, 2020-02, Vol.16 (2), p.e1007696-e1007696

2020

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Glutamate-bound NMDARs arising from in vivo-like network activity extend spatio-temporal integration in a L5 cortical pyramidal cell model

PLoS computational biology, 2014-04, Vol.10 (4), p.e1003590-e1003590

2014

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Specifications of standards in systems and synthetic biology: status and developments in 2022 and the COMBINE meeting 2022

Journal of integrative bioinformatics, 2023-03, Vol.20 (1)

2023

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The first 10 years of the international coordination network for standards in systems and synthetic biology (COMBINE)

Journal of integrative bioinformatics, 2020-06, Vol.17 (2), p.19-895

2020

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Specifications of standards in systems and synthetic biology: status and developments in 2021

Journal of integrative bioinformatics, 2021-10, Vol.18 (3), p.5-95

2021

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Specifications of Standards in Systems and Synthetic Biology: Status and Developments in 2019

Journal of integrative bioinformatics, 2019-07, Vol.16 (2), p.19-95

2019

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Specifications of Standards in Systems and Synthetic Biology: Status and Developments in 2017

Journal of integrative bioinformatics, 2018-03, Vol.15 (1), p.7-9

2018

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A declarative model specification system allowing NeuroML to be extended with user-defined component types

BMC neuroscience, 2012-07, Vol.13 (S1), p.P42-P42, Article P42

2012

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Development of NeuroML version 2.0: greater extensibility, support for abstract neuronal models and interaction with Systems Biology languages

BMC neuroscience, 2011-07, Vol.12 (S1), p.P29-P29, Article P29

2011

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Correction to: Meeting report from the fourth meeting of the Computational Modeling in Biology Network (COMBINE)

Environmental microbiome, 2018-08, Vol.13

2018

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The Open Source Brain Initiative: enabling collaborative modelling in computational neuroscience

BMC neuroscience, 2012-07, Vol.13 (S1), p.O7-O7, Article O7

2012

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Synaptic integration and NMDA spikes in a layer 5 pyramidal neuron model

BMC neuroscience, 2011-07, Vol.12 (S1), p.P301-P301, Article P301

2011

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Specifications of Standards in Systems and Synthetic Biology: Status and Developments in 2016

Journal of integrative bioinformatics, 2016-09, Vol.13 (3), p.1-7

2016

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Integrating model development across computational neuroscience, cognitive science, and machine learning

Neuron (Cambridge, Mass.), 2023-05, Vol.111 (10), p.1526-1530

2023

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neuroConstruct: A Tool for Modeling Networks of Neurons in 3D Space

Neuron (Cambridge, Mass.), 2007-04, Vol.54 (2), p.219-235

2007

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A Commitment to Open Source in Neuroscience

Neuron (Cambridge, Mass.), 2017-12, Vol.96 (5), p.964-965

2017

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Describing and exchanging models of neurons and neuronal networks with NeuroML

BMC neuroscience, 2009-07, Vol.10 (S1), p.L1-L1, Article L1

2009

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Rapid Desynchronization of an Electrically Coupled Interneuron Network with Sparse Excitatory Synaptic Input

Neuron (Cambridge, Mass.), 2010-08, Vol.67 (3), p.435-451

2010

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Geppetto: a reusable modular open platform for exploring neuroscience data and models

Philosophical transactions of the Royal Society of London. Series B. Biological sciences, 2018-09, Vol.373 (1758)

2018

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NineML: the network interchange for neuroscience modeling language

BMC neuroscience, 2011-07, Vol.12 Suppl 1 (Suppl 1), p.P330-P330

2011

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Updated Energy Budgets for Neural Computation in the Neocortex and Cerebellum

NetPyNE, a tool for data-driven multiscale modeling of brain circuits

Open Source Brain: A Collaborative Resource for Visualizing, Analyzing, Simulating, and Developing Standardized Models of Neurons and Circuits

NeuroML: a language for describing data driven models of neurons and networks with a high degree of biological detail

The SONATA data format for efficient description of large-scale network models

Glutamate-bound NMDARs arising from in vivo-like network activity extend spatio-temporal integration in a L5 cortical pyramidal cell model

Specifications of standards in systems and synthetic biology: status and developments in 2022 and the COMBINE meeting 2022

The first 10 years of the international coordination network for standards in systems and synthetic biology (COMBINE)

Code Generation in Computational Neuroscience: A Review of Tools and Techniques

Specifications of standards in systems and synthetic biology: status and developments in 2021

Specifications of Standards in Systems and Synthetic Biology: Status and Developments in 2019

Specifications of Standards in Systems and Synthetic Biology: Status and Developments in 2017

A declarative model specification system allowing NeuroML to be extended with user-defined component types

Development of NeuroML version 2.0: greater extensibility, support for abstract neuronal models and interaction with Systems Biology languages

Correction to: Meeting report from the fourth meeting of the Computational Modeling in Biology Network (COMBINE)

The Open Source Brain Initiative: enabling collaborative modelling in computational neuroscience

Synaptic integration and NMDA spikes in a layer 5 pyramidal neuron model

Specifications of Standards in Systems and Synthetic Biology: Status and Developments in 2016

Integrating model development across computational neuroscience, cognitive science, and machine learning

neuroConstruct: A Tool for Modeling Networks of Neurons in 3D Space

A Commitment to Open Source in Neuroscience

Describing and exchanging models of neurons and neuronal networks with NeuroML

Rapid Desynchronization of an Electrically Coupled Interneuron Network with Sparse Excitatory Synaptic Input

Geppetto: a reusable modular open platform for exploring neuroscience data and models

NineML: the network interchange for neuroscience modeling language

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