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Origin of congenital coronary arterio-ventricular fistulae from anomalous epicardial and myocardial development

Experimental and Molecular Medicine, 2023, 55(0), , pp.228-239

2023

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Assessing the consistency of public human tissue RNA-seq data sets

Briefings in bioinformatics, 2015-11, Vol.16 (6), p.941-949

2015

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From comorbidities of chronic obstructive pulmonary disease to identification of shared molecular mechanisms by data integration

BMC bioinformatics, 2016-11, Vol.17 (Suppl 15), p.441-441, Article 441

2016

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The SALAMANDER project: SALivAry bioMarkers of mediterraneAN Diet associated with long‐tERm protection against type 2 diabetes

Nutrition bulletin, 2017-12, Vol.42 (4), p.369-374

2017

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A beta-mixture quantile normalization method for correcting probe design bias in Illumina Infinium 450 k DNA methylation data

Bioinformatics, 2013-01, Vol.29 (2), p.189-196

2013

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Systems approach to patients with chronic obstructive pulmonary disease. Underlying mechanisms of non-pulmonary manifestations and innovations in management

La revue de medecine interne, 2019-06, Vol.40, p.A30-A36

2019

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A survey of best practices for RNA-seq data analysis

Genome Biology, 2016-01, Vol.17 (1), p.13-13, Article 13

2016

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Harmonization of quality metrics and power calculation in multi-omic studies

Nature communications, 2020-06, Vol.11 (1), p.3092-3092, Article 3092

2020

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Data-driven bioinformatics to disentangle cells within a tissue microenvironment

Trends in cell biology, 2022-06, Vol.32 (6), p.467-469

2022

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Therapeutic efficacy of dimethyl fumarate in relapsing-remitting multiple sclerosis associates with ROS pathway in monocytes

Nature communications, 2019-07, Vol.10 (1), p.3081-13, Article 3081

2019

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Data integration in the era of omics: current and future challenges

BMC Systems Biology, 2014, Vol.8 Suppl 2 (Suppl 2), p.I1-I1

2014

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Targeted lipidomics reveals extensive changes in circulating lipid mediators in patients with acutely decompensated cirrhosis

Journal of hepatology, 2020-10, Vol.73 (4), p.817-828

2020

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Abundance and diversity of resistomes differ between healthy human oral cavities and gut

Nature communications, 2020-02, Vol.11 (1), p.693-10, Article 693

2020

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Differences in subclinical atherosclerosis based on the genotype of patients with severe hypercholesterolemia

Atherosclerosis, 2023-08, Vol.379, p.S60

2023

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An integrative analysis reveals coordinated reprogramming of the epigenome and the transcriptome in human skeletal muscle after training

Epigenetics, 2014-12, Vol.9 (12), p.1557-1569

2014

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Building gene regulatory networks from scATAC-seq and scRNA-seq using Linked Self Organizing Maps

PLoS computational biology, 2019-11, Vol.15 (11), p.e1006555

2019

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Importance of mitochondrial P O 2 in maximal O2 transport and utilization: A theoretical analysis

Respiratory physiology & neurobiology, 2013-12, Vol.189 (3), p.477-483

2013

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GeneSetCluster: a tool for summarizing and integrating gene-set analysis results

BMC bioinformatics, 2020-10, Vol.21 (1), p.1-443, Article 443

2020

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Impact of genetic risk loci in multiple sclerosis on expression of proximal genes

MULTIPLE SCLEROSIS JOURNAL, 2014, Vol.20, p.250

2014

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Identification of novel markers in rheumatoid arthritis through integrated analysis of DNA methylation and microRNA expression

Journal of autoimmunity, 2013-03, Vol.41, p.6-16

2013

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EULAR points to consider for the use of big data in rheumatic and musculoskeletal diseases

Annals of the rheumatic diseases, 2020-01, Vol.79 (1), p.69-76

2020

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DNA methylation changes in glial cells of the normal-appearing white matter in Multiple Sclerosis patients

Epigenetics, 2022-11, Vol.17 (11), p.1311-1330

2022

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Software for the Integration of Multiomics Experiments in Bioconductor

Cancer research (Chicago, Ill.), 2017-11, Vol.77 (21), p.e39-e42

2017

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scAEGAN: Unification of single-cell genomics data by adversarial learning of latent space correspondences

PloS one, 2023-02, Vol.18 (2), p.e0281315

2023

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Monozygotic twins discordant for common variable immunodeficiency reveal impaired DNA demethylation during naïve-to-memory B-cell transition

Nature communications, 2015-06, Vol.6 (1), p.7335-7335, Article 7335

2015

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Origin of congenital coronary arterio-ventricular fistulae from anomalous epicardial and myocardial development

Assessing the consistency of public human tissue RNA-seq data sets

From comorbidities of chronic obstructive pulmonary disease to identification of shared molecular mechanisms by data integration

The SALAMANDER project: SALivAry bioMarkers of mediterraneAN Diet associated with long‐tERm protection against type 2 diabetes

A beta-mixture quantile normalization method for correcting probe design bias in Illumina Infinium 450 k DNA methylation data

Systems approach to patients with chronic obstructive pulmonary disease. Underlying mechanisms of non-pulmonary manifestations and innovations in management

A survey of best practices for RNA-seq data analysis

Harmonization of quality metrics and power calculation in multi-omic studies

Data-driven bioinformatics to disentangle cells within a tissue microenvironment

Therapeutic efficacy of dimethyl fumarate in relapsing-remitting multiple sclerosis associates with ROS pathway in monocytes

Data integration in the era of omics: current and future challenges

Targeted lipidomics reveals extensive changes in circulating lipid mediators in patients with acutely decompensated cirrhosis

Abundance and diversity of resistomes differ between healthy human oral cavities and gut

Differences in subclinical atherosclerosis based on the genotype of patients with severe hypercholesterolemia

An integrative analysis reveals coordinated reprogramming of the epigenome and the transcriptome in human skeletal muscle after training

Building gene regulatory networks from scATAC-seq and scRNA-seq using Linked Self Organizing Maps

Importance of mitochondrial P O 2 in maximal O2 transport and utilization: A theoretical analysis

GeneSetCluster: a tool for summarizing and integrating gene-set analysis results

Impact of genetic risk loci in multiple sclerosis on expression of proximal genes

Identification of novel markers in rheumatoid arthritis through integrated analysis of DNA methylation and microRNA expression

EULAR points to consider for the use of big data in rheumatic and musculoskeletal diseases

DNA methylation changes in glial cells of the normal-appearing white matter in Multiple Sclerosis patients

Software for the Integration of Multiomics Experiments in Bioconductor

scAEGAN: Unification of single-cell genomics data by adversarial learning of latent space correspondences

Monozygotic twins discordant for common variable immunodeficiency reveal impaired DNA demethylation during naïve-to-memory B-cell transition

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