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Microglia and macrophages promote corralling, wound compaction and recovery after spinal cord injury via Plexin-B2

Nature neuroscience, 2020-03, Vol.23 (3), p.337

2020

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Widespread disruption of host transcription termination in HSV-1 infection

Nature communications, 2015-05, Vol.6 (1), p.7126-7126, Article 7126

2015

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A comprehensive evaluation of alignment algorithms in the context of RNA-seq

PloS one, 2012-12, Vol.7 (12), p.e52403-e52403

2012

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HSV-1-induced disruption of transcription termination resembles a cellular stress response but selectively increases chromatin accessibility downstream of genes

PLoS pathogens, 2018-03, Vol.14 (3), p.e1006954-e1006954

2018

Volltextzugriff (PDF)

Quantitative proteomics of the integrin adhesome show a myosin II-dependent recruitment of LIM domain proteins

EMBO reports, 2011-03, Vol.12 (3), p.259-266

2011

Volltextzugriff (PDF)

Watchdog - a workflow management system for the distributed analysis of large-scale experimental data

BMC bioinformatics, 2018-03, Vol.19 (1), p.97-97, Article 97

2018

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Prediction of Poly(A) Sites by Poly(A) Read Mapping

PloS one, 2017-01, Vol.12 (1), p.e0170914-e0170914

2017

Volltextzugriff (PDF)

P-TEFb Activation by RBM7 Shapes a Pro-survival Transcriptional Response to Genotoxic Stress

Molecular cell, 2019-04, Vol.74 (2), p.254-267.e10

2019

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Herpes simplex virus blocks host transcription termination via the bimodal activities of ICP27

Nature communications, 2020-01, Vol.11 (1), p.293-293, Article 293

2020

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HSV-1 and influenza infection induce linear and circular splicing of the long NEAT1 isoform

PloS one, 2022-10, Vol.17 (10), p.e0276467-e0276467

2022

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HSV-1 Infection Induces a Downstream Shift of Promoter-Proximal Pausing for Host Genes

Journal of virology, 2023-05, Vol.97 (5), p.e0038123-e0038123

2023

Volltextzugriff (PDF)

Virus–host interactomes and global models of virus-infected cells

Trends in microbiology (Regular ed.), 2011-10, Vol.19 (10), p.501-508

2011

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High-resolution gene expression profiling for simultaneous kinetic parameter analysis of RNA synthesis and decay

RNA (Cambridge), 2008-09, Vol.14 (9), p.1959-1972

2008

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ContextMap 2: fast and accurate context-based RNA-seq mapping

BMC bioinformatics, 2015-04, Vol.16 (1), p.122-122, Article 122

2015

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Mechanism and consequences of herpes simplex virus 1-mediated regulation of host mRNA alternative polyadenylation

PLoS genetics, 2021-03, Vol.17 (3), p.e1009263-e1009263

2021

Volltextzugriff (PDF)

Decoding murine cytomegalovirus

PLoS pathogens, 2023-05, Vol.19 (5), p.e1010992-e1010992

2023

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Calpain-mediated cleavage of collapsin response mediator protein-2 drives acute axonal degeneration

Scientific reports, 2016-11, Vol.6 (1), p.37050-37050, Article 37050

2016

Volltextzugriff (PDF)

Ultrashort and progressive 4sU-tagging reveals key characteristics of RNA processing at nucleotide resolution

Genome research, 2012-10, Vol.22 (10), p.2031

2012

Volltextzugriff (PDF)

Evolutionarily conserved herpesviral protein interaction networks

PLoS pathogens, 2009-09, Vol.5 (9), p.e1000570-e1000570

2009

Volltextzugriff (PDF)

The HSV-1 ICP22 protein selectively impairs histone repositioning upon Pol II transcription downstream of genes

Nature communications, 2023-07, Vol.14 (1), p.4591-4591, Article 4591

2023

Volltextzugriff (PDF)

Dissecting Herpes Simplex Virus 1-Induced Host Shutoff at the RNA Level

Journal of virology, 2021-01, Vol.95 (3)

2021

Volltextzugriff (PDF)

Immune homeostasis and regulation of the interferon pathway require myeloid-derived Regnase-3

The Journal of experimental medicine, 2019-07, Vol.216 (7), p.1700-1723

2019

Volltextzugriff (PDF)

Analysis of intraviral protein-protein interactions of the SARS coronavirus ORFeome

PloS one, 2007-05, Vol.2 (5), p.e459-e459

2007

Volltextzugriff (PDF)

Genome-wide assessment of AU-rich elements by the AREScore algorithm

PLoS genetics, 2012-01, Vol.8 (1), p.e1002433-e1002433

2012

Volltextzugriff (PDF)

A systematic analysis of host factors reveals a Med23-interferon-λ regulatory axis against herpes simplex virus type 1 replication

PLoS pathogens, 2013-08, Vol.9 (8), p.e1003514

2013

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Microglia and macrophages promote corralling, wound compaction and recovery after spinal cord injury via Plexin-B2

Widespread disruption of host transcription termination in HSV-1 infection

A comprehensive evaluation of alignment algorithms in the context of RNA-seq

HSV-1-induced disruption of transcription termination resembles a cellular stress response but selectively increases chromatin accessibility downstream of genes

Quantitative proteomics of the integrin adhesome show a myosin II-dependent recruitment of LIM domain proteins

Watchdog - a workflow management system for the distributed analysis of large-scale experimental data

Prediction of Poly(A) Sites by Poly(A) Read Mapping

P-TEFb Activation by RBM7 Shapes a Pro-survival Transcriptional Response to Genotoxic Stress

Herpes simplex virus blocks host transcription termination via the bimodal activities of ICP27

HSV-1 and influenza infection induce linear and circular splicing of the long NEAT1 isoform

HSV-1 Infection Induces a Downstream Shift of Promoter-Proximal Pausing for Host Genes

Virus–host interactomes and global models of virus-infected cells

High-resolution gene expression profiling for simultaneous kinetic parameter analysis of RNA synthesis and decay

ContextMap 2: fast and accurate context-based RNA-seq mapping

Mechanism and consequences of herpes simplex virus 1-mediated regulation of host mRNA alternative polyadenylation

Decoding murine cytomegalovirus

Calpain-mediated cleavage of collapsin response mediator protein-2 drives acute axonal degeneration

Ultrashort and progressive 4sU-tagging reveals key characteristics of RNA processing at nucleotide resolution

Evolutionarily conserved herpesviral protein interaction networks

The HSV-1 ICP22 protein selectively impairs histone repositioning upon Pol II transcription downstream of genes

Dissecting Herpes Simplex Virus 1-Induced Host Shutoff at the RNA Level

Immune homeostasis and regulation of the interferon pathway require myeloid-derived Regnase-3

Analysis of intraviral protein-protein interactions of the SARS coronavirus ORFeome

Genome-wide assessment of AU-rich elements by the AREScore algorithm

A systematic analysis of host factors reveals a Med23-interferon-λ regulatory axis against herpes simplex virus type 1 replication

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