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An archaeal origin of eukaryotes supports only two primary domains of life

Nature (London), 2013-12, Vol.504 (7479), p.231-236

2013

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Integrative modeling of gene and genome evolution roots the archaeal tree of life

Proceedings of the National Academy of Sciences - PNAS, 2017-06, Vol.114 (23), p.E4602-E4611

2017

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Nuclear protein phylogenies support the monophyly of the three bryophyte groups (Bryophyta Schimp.)

The New phytologist, 2019-04, Vol.222 (1), p.565-575

2019

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Conflicting Phylogenies for Early Land Plants are Caused by Composition Biases among Synonymous Substitutions

Systematic biology, 2014-03, Vol.63 (2), p.272-279

2014

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The Chloroplast Land Plant Phylogeny: Analyses Employing Better-Fitting Tree- and Site-Heterogeneous Composition Models

Frontiers in plant science, 2020-07, Vol.11, p.1062-1062

2020

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Family-Level Sampling of Mitochondrial Genomes in Coleoptera: Compositional Heterogeneity and Phylogenetics

Genome biology and evolution, 2016-01, Vol.8 (1), p.161-175

2016

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archaebacterial origin of eukaryotes

Proceedings of the National Academy of Sciences - PNAS, 2008-12, Vol.105 (51), p.20356-20361

2008

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Horizontal gene transfer facilitated the evolution of plant parasitic mechanisms in the oomycetes

Proceedings of the National Academy of Sciences - PNAS, 2011-09, Vol.108 (37), p.15258-15263

2011

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Phylogenetic analysis and DNA-based species confirmation in Anopheles (Nyssorhynchus)

PloS one, 2013-02, Vol.8 (2), p.e54063-e54063

2013

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Patterns of prokaryotic lateral gene transfers affecting parasitic microbial eukaryotes

Genome Biology, 2013-01, Vol.14 (2), p.R19-R19

2013

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The mitochondrial phylogeny of land plants shows support for Setaphyta under composition-heterogeneous substitution models

PeerJ (San Francisco, CA), 2020-04, Vol.8, p.e8995-e8995, Article e8995

2020

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Phylogeny of Anophelinae using mitochondrial protein coding genes

Royal Society open science, 2017-11, Vol.4 (11), p.170758-170758

2017

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Phylogenomic Analysis Demonstrates a Pattern of Rare and Ancient Horizontal Gene Transfer between Plants and Fungi

The Plant cell, 2009-07, Vol.21 (7), p.1897-1911

2009

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Evolutionary conservation of Trichomonas-mycoplasma symbiosis across the host species barrier

Frontiers in microbiology, 2023-09, Vol.14, p.1242275-1242275

2023

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Inferring the Deep Past from Molecular Data

Genome biology and evolution, 2021-03, Vol.13 (5)

2021

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Whole-community DNA barcoding reveals a spatio-temporal continuum of biodiversity at species and genetic levels

Nature communications, 2013, Vol.4 (1), p.1892-1892, Article 1892

2013

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Data-specific substitution models improve protein-based phylogenetics

PeerJ (San Francisco, CA), 2023-08, Vol.11, p.e15716-e15716, Article e15716

2023

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The primary divisions of life: a phylogenomic approach employing composition-heterogeneous methods

Philosophical transactions of the Royal Society of London. Series B. Biological sciences, 2009-08, Vol.364 (1527), p.2197

2009

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Phylogenetic Analysis That Models Compositional Heterogeneity over the Tree

Methods in molecular biology (Clifton, N.J.), 2022, Vol.2569, p.119

Foster, Peter G

2022

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Can quartet analyses combining maximum likelihood estimation and Hennigian logic overcome long branch attraction in phylogenomic sequence data?

PloS one, 2017-08, Vol.12 (8), p.e0183393-e0183393

2017

Volltextzugriff (PDF)

Reduction and expansion in microsporidian genome evolution: new insights from comparative genomics

Genome biology and evolution, 2013-01, Vol.5 (12), p.2285-2303

2013

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Next-Generation Mitogenomics: A Comparison of Approaches Applied to Caecilian Amphibian Phylogeny

PloS one, 2016-06, Vol.11 (6), p.e0156757

2016

Volltextzugriff (PDF)

Evolutionary Origins of the Eukaryotic Shikimate Pathway: Gene Fusions, Horizontal Gene Transfer, and Endosymbiotic Replacements

Eukaryotic Cell, 2006-09, Vol.5 (9), p.1517-1531

2006

Volltextzugriff (PDF)

Bias in Phylogenetic Estimation and Its Relevance to the Choice between Parsimony and Likelihood Methods

Systematic biology, 2001-08, Vol.50 (4), p.525-539

2001

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Next generation sequencing and comparative analyses of Xenopus mitogenomes

BMC genomics, 2012-09, Vol.13 (1), p.496-496

2012

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An archaeal origin of eukaryotes supports only two primary domains of life

Integrative modeling of gene and genome evolution roots the archaeal tree of life

Nuclear protein phylogenies support the monophyly of the three bryophyte groups (Bryophyta Schimp.)

Conflicting Phylogenies for Early Land Plants are Caused by Composition Biases among Synonymous Substitutions

The Chloroplast Land Plant Phylogeny: Analyses Employing Better-Fitting Tree- and Site-Heterogeneous Composition Models

Family-Level Sampling of Mitochondrial Genomes in Coleoptera: Compositional Heterogeneity and Phylogenetics

archaebacterial origin of eukaryotes

Horizontal gene transfer facilitated the evolution of plant parasitic mechanisms in the oomycetes

Phylogenetic analysis and DNA-based species confirmation in Anopheles (Nyssorhynchus)

Patterns of prokaryotic lateral gene transfers affecting parasitic microbial eukaryotes

The mitochondrial phylogeny of land plants shows support for Setaphyta under composition-heterogeneous substitution models

Phylogeny of Anophelinae using mitochondrial protein coding genes

Phylogenomic Analysis Demonstrates a Pattern of Rare and Ancient Horizontal Gene Transfer between Plants and Fungi

Evolutionary conservation of Trichomonas-mycoplasma symbiosis across the host species barrier

Inferring the Deep Past from Molecular Data

Whole-community DNA barcoding reveals a spatio-temporal continuum of biodiversity at species and genetic levels

Data-specific substitution models improve protein-based phylogenetics

The primary divisions of life: a phylogenomic approach employing composition-heterogeneous methods

Phylogenetic Analysis That Models Compositional Heterogeneity over the Tree

Can quartet analyses combining maximum likelihood estimation and Hennigian logic overcome long branch attraction in phylogenomic sequence data?

Reduction and expansion in microsporidian genome evolution: new insights from comparative genomics

Next-Generation Mitogenomics: A Comparison of Approaches Applied to Caecilian Amphibian Phylogeny

Evolutionary Origins of the Eukaryotic Shikimate Pathway: Gene Fusions, Horizontal Gene Transfer, and Endosymbiotic Replacements

Bias in Phylogenetic Estimation and Its Relevance to the Choice between Parsimony and Likelihood Methods

Next generation sequencing and comparative analyses of Xenopus mitogenomes

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