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GPQuest: A Spectral Library Matching Algorithm for Site-Specific Assignment of Tandem Mass Spectra to Intact N‑glycopeptides

Analytical chemistry (Washington), 2015-05, Vol.87 (10), p.5181-5188

2015

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Comparison of Enrichment Methods for Intact N- and O‑Linked Glycopeptides Using Strong Anion Exchange and Hydrophilic Interaction Liquid Chromatography

Analytical chemistry (Washington), 2017-11, Vol.89 (21), p.11193-11197

2017

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A targeted amplicon next-generation sequencing assay for tryptase genotyping to support personalized therapy in mast cell-related disorders

PloS one, 2024-02, Vol.19 (2), p.e0291947-e0291947

2024

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Classification of Tandem Mass Spectra for Identification of N- and O-linked Glycopeptides

Scientific reports, 2016-11, Vol.6 (1), p.37189-37189, Article 37189

2016

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Imaging of N‑Linked Glycans from Formalin-Fixed Paraffin-Embedded Tissue Sections Using MALDI Mass Spectrometry

ACS chemical biology, 2014-09, Vol.9 (9), p.2149-2156

2014

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Quantitative Comparison of Conventional and t-SNE-guided Gating Analyses

Frontiers in immunology, 2019-06, Vol.10, p.1194-1194

2019

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Glycoform Analysis of Recombinant and Human Immunodeficiency Virus Envelope Protein gp120 via Higher Energy Collisional Dissociation and Spectral-Aligning Strategy

Analytical chemistry (Washington), 2014-07, Vol.86 (14), p.6959-6967

2014

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Quality assessment and interference detection in targeted mass spectrometry data using machine learning

Clinical proteomics, 2018-10, Vol.15 (1), p.33-33, Article 33

2018

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Glycomic Analysis by Glycoprotein Immobilization for Glycan Extraction and Liquid Chromatography on Microfluidic Chip

Analytical chemistry (Washington), 2013-11, Vol.85 (21), p.10117-10125

2013

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Targeted Analyte Detection by Standard Addition Improves Detection Limits in Matrix-Assisted Laser Desorption/Ionization Mass Spectrometry

Analytical chemistry (Washington), 2012-09, Vol.84 (18), p.7626-7632

2012

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Integrated Proteomic and Glycoproteomic Analyses of Prostate Cancer Cells Reveal Glycoprotein Alteration in Protein Abundance and Glycosylation

Molecular & cellular proteomics, 2015-10, Vol.14 (10), p.2753-2763

2015

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Comprehensive analysis of protein glycosylation by solid-phase extraction of N-linked glycans and glycosite-containing peptides

Nature biotechnology, 2016-01, Vol.34 (1), p.84-88

2016

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Development of a therapeutic anti-HtrA1 antibody and the identification of DKK3 as a pharmacodynamic biomarker in geographic atrophy

Proceedings of the National Academy of Sciences - PNAS, 2020-05, Vol.117 (18), p.9952-9963

2020

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Epithelium percentage estimation facilitates epithelial quantitative protein measurement in tissue specimens

Clinical proteomics, 2013-12, Vol.10 (1), p.18-18, Article 18

2013

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Site-Specific Profiling of Serum Glycoproteins Using N-Linked Glycan and Glycosite Analysis Revealing Atypical N-Glycosylation Sites on Albumin and α‑1B-Glycoprotein

Analytical chemistry (Washington), 2018-05, Vol.90 (10), p.6292-6299

2018

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Chemoenzymatic method for glycomics: Isolation, identification, and quantitation

Proteomics (Weinheim), 2016-01, Vol.16 (2), p.241-256

2016

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Su1747 REWIRING OF PATHWAY INTERACTIONS IN INFLAMED TISSUE OF ULCERATIVE COLITIS PATIENTS POINTS TO SPECIFIC LIGANDRECEPTOR ACTIVITIES ON NEUTROPHIL AND MACROPHAGE SUBSETS

Gastroenterology (New York, N.Y. 1943), 2024-05, Vol.166 (5), p.S-795-S-795

2024

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Evaluation of oligonucleotide conjugated antibodies as reporter molecules in single-cell assays

The Journal of immunology (1950), 2020-05, Vol.204 (1_Supplement), p.86-86.35

2020

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Tu1746 SINGLE-CELL TRANSCRIPTOMICS REVEAL TISSUE NEUTROPHIL HETEROGENEITY AND NEUTROPHIL-INFLAMMATORY FIBROBLAST SIGNALING PATHWAYS ASSOCIATED WITH RESISTANCE TO APPROVED THERAPIES IN ULCERATIVE COLITIS

Gastroenterology (New York, N.Y. 1943), 2024-05, Vol.166 (5), p.S-1404-S-1404

2024

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Site-Specific Profiling of Serum Glycoproteins Using N-Linked Glycan and Glycosite Analysis Revealing Atypical N-Glycosylation Sites on Albumin and a-1B-Glycoprotein

Analytical chemistry (Washington), 2018-05, Vol.90 (10), p.6292

2018

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570 MYELOID CELL DYSREGULATION ASSOCIATES WITH NON-RESPONSE TO ANTI-TNF THERAPIES

Gastroenterology (New York, N.Y. 1943), 2023-05, Vol.164 (6), p.S-102-S-102

2023

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Targeted Analyte Detection by Standard Addition Improves Detection Limits in MALDI Mass Spectrometry

Analytical chemistry (Washington), 2012-08, Vol.84 (18), p.7626-7632

2012

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GPQuest: A Spectral Library Matching Algorithm for Site-Specific Assignment of Tandem Mass Spectra to Intact N‑glycopeptides

Comparison of Enrichment Methods for Intact N- and O‑Linked Glycopeptides Using Strong Anion Exchange and Hydrophilic Interaction Liquid Chromatography

A targeted amplicon next-generation sequencing assay for tryptase genotyping to support personalized therapy in mast cell-related disorders

Classification of Tandem Mass Spectra for Identification of N- and O-linked Glycopeptides

Imaging of N‑Linked Glycans from Formalin-Fixed Paraffin-Embedded Tissue Sections Using MALDI Mass Spectrometry

Quantitative Comparison of Conventional and t-SNE-guided Gating Analyses

Glycoform Analysis of Recombinant and Human Immunodeficiency Virus Envelope Protein gp120 via Higher Energy Collisional Dissociation and Spectral-Aligning Strategy

Quality assessment and interference detection in targeted mass spectrometry data using machine learning

Glycomic Analysis by Glycoprotein Immobilization for Glycan Extraction and Liquid Chromatography on Microfluidic Chip

Targeted Analyte Detection by Standard Addition Improves Detection Limits in Matrix-Assisted Laser Desorption/Ionization Mass Spectrometry

Integrated Proteomic and Glycoproteomic Analyses of Prostate Cancer Cells Reveal Glycoprotein Alteration in Protein Abundance and Glycosylation

Comprehensive analysis of protein glycosylation by solid-phase extraction of N-linked glycans and glycosite-containing peptides

Development of a therapeutic anti-HtrA1 antibody and the identification of DKK3 as a pharmacodynamic biomarker in geographic atrophy

Epithelium percentage estimation facilitates epithelial quantitative protein measurement in tissue specimens

Site-Specific Profiling of Serum Glycoproteins Using N-Linked Glycan and Glycosite Analysis Revealing Atypical N-Glycosylation Sites on Albumin and α‑1B-Glycoprotein

Chemoenzymatic method for glycomics: Isolation, identification, and quantitation

Su1747 REWIRING OF PATHWAY INTERACTIONS IN INFLAMED TISSUE OF ULCERATIVE COLITIS PATIENTS POINTS TO SPECIFIC LIGANDRECEPTOR ACTIVITIES ON NEUTROPHIL AND MACROPHAGE SUBSETS

Evaluation of oligonucleotide conjugated antibodies as reporter molecules in single-cell assays

Tu1746 SINGLE-CELL TRANSCRIPTOMICS REVEAL TISSUE NEUTROPHIL HETEROGENEITY AND NEUTROPHIL-INFLAMMATORY FIBROBLAST SIGNALING PATHWAYS ASSOCIATED WITH RESISTANCE TO APPROVED THERAPIES IN ULCERATIVE COLITIS

Site-Specific Profiling of Serum Glycoproteins Using N-Linked Glycan and Glycosite Analysis Revealing Atypical N-Glycosylation Sites on Albumin and a-1B-Glycoprotein

570 MYELOID CELL DYSREGULATION ASSOCIATES WITH NON-RESPONSE TO ANTI-TNF THERAPIES

Targeted Analyte Detection by Standard Addition Improves Detection Limits in MALDI Mass Spectrometry

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