UB Paderborn / Katalog / Suche / in CDI

Prospective genomic characterization of the German enterohemorrhagic Escherichia coli O104:H4 outbreak by rapid next generation sequencing technology

PloS one, 2011-07, Vol.6 (7), p.e22751-e22751

2011

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Comparative analysis of genome sequences covering the seven cronobacter species

PloS one, 2012-11, Vol.7 (11), p.e49455-e49455

2012

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Comparative genomics of the bacterial genus Listeria: Genome evolution is characterized by limited gene acquisition and limited gene loss

BMC genomics, 2010-12, Vol.11 (1), p.688-688, Article 688

2010

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Genome sequencing reveals diversification of virulence factor content and possible host adaptation in distinct subpopulations of Salmonella enterica

BMC genomics, 2011-08, Vol.12 (1), p.425-425, Article 425

2011

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Bordetella pertussis, the causative agent of whooping cough, evolved from a distinct, human-associated lineage of B. bronchiseptica

PLoS pathogens, 2005-12, Vol.1 (4), p.e45-e45

2005

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Identification and characterization of novel Salmonella mobile elements involved in the dissemination of genes linked to virulence and transmission

PloS one, 2012-07, Vol.7 (7), p.e41247-e41247

2012

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A Whole-Genome Single Nucleotide Polymorphism-Based Approach To Trace and Identify Outbreaks Linked to a Common Salmonella enterica subsp. enterica Serovar Montevideo Pulsed-Field Gel Electrophoresis Type

Applied and Environmental Microbiology, 2011-12, Vol.77 (24), p.8648-8655

2011

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Using Whole Genome Analysis to Examine Recombination across Diverse Sequence Types of Staphylococcus aureus

PloS one, 2015-07, Vol.10 (7), p.e0130955-e0130955

2015

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Transcriptional Profiling of the Iron Starvation Response in Bordetella pertussis Provides New Insights into Siderophore Utilization and Virulence Gene Expression

Journal of Bacteriology, 2011-09, Vol.193 (18), p.4798-4812

2011

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Escherichia coli Serotype O55:H7 Diversity Supports Parallel Acquisition of Bacteriophage at Shiga Toxin Phage Insertion Sites during Evolution of the O157:H7 Lineage

Journal of Bacteriology, 2012-04, Vol.194 (8), p.1885-1896

2012

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Blood-based tumor mutational burden as a predictor of clinical benefit in non-small-cell lung cancer patients treated with atezolizumab

Nature medicine, 2018-09, Vol.24 (9), p.1441-1448

2018

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Significant Gene Order and Expression Differences in Bordetella pertussis Despite Limited Gene Content Variation

Journal of Bacteriology, 2006-04, Vol.188 (7), p.2375-2382

2006

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ALK Mutation Status Before and After Alectinib Treatment in Locally Advanced or Metastatic ALK-Positive NSCLC: Pooled Analysis of Two Prospective Trials

Journal of thoracic oncology, 2020-04, Vol.15 (4), p.601-608

2020

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Phase variation and microevolution at homopolymeric tracts in Bordetella pertussis

BMC genomics, 2007-05, Vol.8 (1), p.122-122, Article 122

2007

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Growth Phase- and Nutrient Limitation-Associated Transcript Abundance Regulation in Bordetella pertussis

Infection and Immunity, 2006-10, Vol.74 (10), p.5537-5548

2006

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Probabilistic Mixture Models Improve Calibration of Panel-derived Tumor Mutational Burden in the Context of both Tumor-normal and Tumor-only Sequencing

Cancer research communications, 2023-03, Vol.3 (3), p.501-509

2023

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Using DNA microarrays to study host-microbe interactions

Emerging infectious diseases, 2000-09, Vol.6 (5), p.513-525

2000

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Genomic characterization of Salmonella Cerro ST367, an emerging Salmonella subtype in cattle in the United States

BMC genomics, 2014-06, Vol.15 (1), p.427-427, Article 427

2014

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daughterless coordinates somatic cell proliferation, differentiation and germline cyst survival during follicle formation in Drosophila

Development (Cambridge), 2002-07, Vol.129 (13), p.3255-3267

2002

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Molecular characterization of the predominant influenza A(H1N1)pdm09 virus in Mexico, December 2011-February 2012

PloS one, 2012-11, Vol.7 (11), p.e50116-e50116

2012

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Nuclear ribosomal internal transcribed spacer (ITS) region as a universal DNA barcode marker for Fungi

Proceedings of the National Academy of Sciences - PNAS, 2012-04, Vol.109 (16), p.6241-6246

2012

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Microbial Forensics: "Cross-Examining Pathogens"

Science (American Association for the Advancement of Science), 2002-06, Vol.296 (5575), p.1976-1979

2002

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Accurate, rapid and high-throughput detection of strain-specific polymorphisms in Bacillus anthracis and Yersinia pestis by next-generation sequencing

Investigative genetics, 2010-09, Vol.1 (1), p.5-5, Article 5

2010

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A novel rhoptry protein in Toxoplasma gondii bradyzoites and merozoites

Molecular and biochemical parasitology, 2005-12, Vol.144 (2), p.159-166

2005

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Application of SOTA, a growing neural network algorithm, to gene expression profile clustering

Briefings in bioinformatics, 2001-12, Vol.2 (4), p.402-404

Cummings, C. A.

2001

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Prospective genomic characterization of the German enterohemorrhagic Escherichia coli O104:H4 outbreak by rapid next generation sequencing technology

Comparative analysis of genome sequences covering the seven cronobacter species

Comparative genomics of the bacterial genus Listeria: Genome evolution is characterized by limited gene acquisition and limited gene loss

Genome sequencing reveals diversification of virulence factor content and possible host adaptation in distinct subpopulations of Salmonella enterica

Bordetella pertussis, the causative agent of whooping cough, evolved from a distinct, human-associated lineage of B. bronchiseptica

Identification and characterization of novel Salmonella mobile elements involved in the dissemination of genes linked to virulence and transmission

A Whole-Genome Single Nucleotide Polymorphism-Based Approach To Trace and Identify Outbreaks Linked to a Common Salmonella enterica subsp. enterica Serovar Montevideo Pulsed-Field Gel Electrophoresis Type

Using Whole Genome Analysis to Examine Recombination across Diverse Sequence Types of Staphylococcus aureus

Transcriptional Profiling of the Iron Starvation Response in Bordetella pertussis Provides New Insights into Siderophore Utilization and Virulence Gene Expression

Escherichia coli Serotype O55:H7 Diversity Supports Parallel Acquisition of Bacteriophage at Shiga Toxin Phage Insertion Sites during Evolution of the O157:H7 Lineage

Blood-based tumor mutational burden as a predictor of clinical benefit in non-small-cell lung cancer patients treated with atezolizumab

Significant Gene Order and Expression Differences in Bordetella pertussis Despite Limited Gene Content Variation

ALK Mutation Status Before and After Alectinib Treatment in Locally Advanced or Metastatic ALK-Positive NSCLC: Pooled Analysis of Two Prospective Trials

Phase variation and microevolution at homopolymeric tracts in Bordetella pertussis

Growth Phase- and Nutrient Limitation-Associated Transcript Abundance Regulation in Bordetella pertussis

Probabilistic Mixture Models Improve Calibration of Panel-derived Tumor Mutational Burden in the Context of both Tumor-normal and Tumor-only Sequencing

Using DNA microarrays to study host-microbe interactions

Genomic characterization of Salmonella Cerro ST367, an emerging Salmonella subtype in cattle in the United States

daughterless coordinates somatic cell proliferation, differentiation and germline cyst survival during follicle formation in Drosophila

Molecular characterization of the predominant influenza A(H1N1)pdm09 virus in Mexico, December 2011-February 2012

Nuclear ribosomal internal transcribed spacer (ITS) region as a universal DNA barcode marker for Fungi

Microbial Forensics: "Cross-Examining Pathogens"

Accurate, rapid and high-throughput detection of strain-specific polymorphisms in Bacillus anthracis and Yersinia pestis by next-generation sequencing

A novel rhoptry protein in Toxoplasma gondii bradyzoites and merozoites

Application of SOTA, a growing neural network algorithm, to gene expression profile clustering

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