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GlycoMME, a Markov modeling platform for studying N-glycosylation biosynthesis from glycomics data

STAR protocols, 2023-06, Vol.4 (2), p.102244-102244, Article 102244

2023

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Preparing glycomics data for robust statistical analysis with GlyCompareCT

STAR protocols, 2023-06, Vol.4 (2), p.102162-102162, Article 102162

2023

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A Markov model of glycosylation elucidates isozyme specificity and glycosyltransferase interactions for glycoengineering

Current research in biotechnology, 2020-11, Vol.2, p.22-36

2020

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Model-based assessment of mammalian cell metabolic functionalities using omics data

Cell reports methods, 2021-07, Vol.1 (3), p.100040, Article 100040

2021

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Combating viral contaminants in CHO cells by engineering innate immunity

Scientific reports, 2019-06, Vol.9 (1), p.8827-15, Article 8827

2019

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Hemodynamic response to primary prophylactic therapy with nonselective β-blockers is related to a reduction of first variceal bleeding risk in liver cirrhosis: a meta-analysis

European journal of gastroenterology & hepatology, 2017-04, Vol.29 (4), p.380-387

2017

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Artificial intelligence in the analysis of glycosylation data

Biotechnology advances, 2022-11, Vol.60, p.108008-108008, Article 108008

2022

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Increasing consensus of context-specific metabolic models by integrating data-inferred cell functions

PLoS computational biology, 2019-04, Vol.15 (4), p.e1006867

2019

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Multiplex secretome engineering enhances recombinant protein production and purity

Nature communications, 2020-04, Vol.11 (1), p.1908-1908, Article 1908

2020

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Elucidating Human Milk Oligosaccharide biosynthetic genes through network-based multi-omics integration

Nature communications, 2022-05, Vol.13 (1), p.2455-2455, Article 2455

2022

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Increased Production of LIGHT by T Cells in Eosinophilic Esophagitis Promotes Differentiation of Esophageal Fibroblasts Toward an Inflammatory Phenotype

Gastroenterology (New York, N.Y. 1943), 2020-11, Vol.159 (5), p.1778-1792.e13

2020

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A unique esophageal extracellular matrix proteome alters normal fibroblast function in severe eosinophilic esophagitis

Journal of allergy and clinical immunology, 2021-08, Vol.148 (2), p.486-494

2021

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Correcting for sparsity and interdependence in glycomics by accounting for glycan biosynthesis

Nature communications, 2021-08, Vol.12 (1), p.4988-4988, Article 4988

2021

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A predictive ensemble classifier for the gene expression diagnosis of ASD at ages 1 to 4 years

Molecular psychiatry, 2023-02, Vol.28 (2), p.822-833

2023

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Non-protective immune imprint underlies failure of Staphylococcus aureus IsdB vaccine

Cell host & microbe, 2022-08, Vol.30 (8), p.1163-1172.e6

2022

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ZNF263 is a transcriptional regulator of heparin and heparan sulfate biosynthesis

Proceedings of the National Academy of Sciences - PNAS, 2020-04, Vol.117 (17), p.9311-9317

2020

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Study on Preparation of Flexible Semiconductor Electrode for Dye-sensitized Solar Cells by EPD

Manufacturing Science and Technology, 2015-12, Vol.3 (4), p.170-176

2015

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Mechanotransduction-induced interplay between phospholamban and yes-activated protein induces smooth muscle cell hypertrophy

Mucosal immunology, 2024-06, Vol.17 (3), p.315-322

2024

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Genome-wide screens uncover KDM2B as a modifier of protein binding to heparan sulfate

Nature chemical biology, 2021-06, Vol.17 (6), p.684

2021

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LipidSIM: Inferring mechanistic lipid biosynthesis perturbations from lipidomics with a flexible, low-parameter, Markov modeling framework

Metabolic engineering, 2024-03, Vol.82, p.110-122

2024

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CHOGlycoNET: Comprehensive glycosylation reaction network for CHO cells

Metabolic engineering, 2023-03, Vol.76, p.87-96

2023

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LIGHT controls distinct homeostatic and inflammatory gene expression profiles in esophageal fibroblasts via differential HVEM and LTβR-mediated mechanisms

Mucosal immunology, 2022-02, Vol.15 (2), p.327-337

2022

Volltextzugriff (PDF)

Correcting for sparsity and non‐independence in glycomic data through a systems biology framework

The FASEB journal, 2020-04, Vol.34 (S1), p.1-1

2020

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Modulating carbohydrate–protein interactions through glycoengineering of monoclonal antibodies to impact cancer physiology

Current opinion in structural biology, 2016-10, Vol.40, p.104-111

2016

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Elucidate Glycosyltransferase Specificities And Interactions for Rational Glycoengineering

The FASEB journal, 2020-04, Vol.34 (S1), p.1-1

2020

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GlycoMME, a Markov modeling platform for studying N-glycosylation biosynthesis from glycomics data

Preparing glycomics data for robust statistical analysis with GlyCompareCT

A Markov model of glycosylation elucidates isozyme specificity and glycosyltransferase interactions for glycoengineering

Model-based assessment of mammalian cell metabolic functionalities using omics data

Combating viral contaminants in CHO cells by engineering innate immunity

Hemodynamic response to primary prophylactic therapy with nonselective β-blockers is related to a reduction of first variceal bleeding risk in liver cirrhosis: a meta-analysis

Artificial intelligence in the analysis of glycosylation data

Increasing consensus of context-specific metabolic models by integrating data-inferred cell functions

Multiplex secretome engineering enhances recombinant protein production and purity

Elucidating Human Milk Oligosaccharide biosynthetic genes through network-based multi-omics integration

Increased Production of LIGHT by T Cells in Eosinophilic Esophagitis Promotes Differentiation of Esophageal Fibroblasts Toward an Inflammatory Phenotype

A unique esophageal extracellular matrix proteome alters normal fibroblast function in severe eosinophilic esophagitis

Correcting for sparsity and interdependence in glycomics by accounting for glycan biosynthesis

A predictive ensemble classifier for the gene expression diagnosis of ASD at ages 1 to 4 years

Non-protective immune imprint underlies failure of Staphylococcus aureus IsdB vaccine

ZNF263 is a transcriptional regulator of heparin and heparan sulfate biosynthesis

Study on Preparation of Flexible Semiconductor Electrode for Dye-sensitized Solar Cells by EPD

Mechanotransduction-induced interplay between phospholamban and yes-activated protein induces smooth muscle cell hypertrophy

Genome-wide screens uncover KDM2B as a modifier of protein binding to heparan sulfate

LipidSIM: Inferring mechanistic lipid biosynthesis perturbations from lipidomics with a flexible, low-parameter, Markov modeling framework

CHOGlycoNET: Comprehensive glycosylation reaction network for CHO cells

LIGHT controls distinct homeostatic and inflammatory gene expression profiles in esophageal fibroblasts via differential HVEM and LTβR-mediated mechanisms

Correcting for sparsity and non‐independence in glycomic data through a systems biology framework

Modulating carbohydrate–protein interactions through glycoengineering of monoclonal antibodies to impact cancer physiology

Elucidate Glycosyltransferase Specificities And Interactions for Rational Glycoengineering

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