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Whole-Genome Sequencing and Social-Network Analysis of a Tuberculosis Outbreak

The New England journal of medicine, 2011-02, Vol.364 (8), p.730-739

2011

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The use of prescription medications and non-prescription medications during lactation in a prospective Canadian cohort study

International breastfeeding journal, 2024-04, Vol.19 (1), p.23-23, Article 23

2024

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Pathway-GPS and SIGORA: identifying relevant pathways based on the over-representation of their gene-pair signatures

PeerJ (San Francisco, CA), 2013-12, Vol.1, p.e229-e229

2013

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Detecting genomic islands using bioinformatics approaches

Nature reviews. Microbiology, 2010-05, Vol.8 (5), p.373-382

2010

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PSORTdb: expanding the bacteria and archaea protein subcellular localization database to better reflect diversity in cell envelope structures

Nucleic acids research, 2016-01, Vol.44 (D1), p.D663-D668

2016

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Disruption of the Gut Microbiota With Antibiotics Exacerbates Acute Vascular Rejection

Transplantation, 2018-07, Vol.102 (7), p.1085-1095

2018

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Pseudomonas Genome Database: facilitating user-friendly, comprehensive comparisons of microbial genomes

Nucleic acids research, 2009-01, Vol.37 (Database issue), p.D483-D488

2009

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Raloxifene attenuates Pseudomonas aeruginosa pyocyanin production and virulence

International journal of antimicrobial agents, 2012-09, Vol.40 (3), p.246-251

2012

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Enabling a systems biology approach to immunology: focus on innate immunity

Trends in immunology, 2009-06, Vol.30 (6), p.249-262

2009

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PSORTdb--an expanded, auto-updated, user-friendly protein subcellular localization database for Bacteria and Archaea

Nucleic acids research, 2011-01, Vol.39 (Database issue), p.D241-D244

2011

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proportional lack of archaeal pathogens: Do viruses/phages hold the key

BioEssays, 2011-04, Vol.33 (4), p.248-254

2011

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Pathogen-associated gene discovery workflows for novel antivirulence therapeutic development

EBioMedicine, 2023-02, Vol.88, p.104429, Article 104429

2023

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Identification of the regulatory logic controlling Salmonella pathoadaptation by the SsrA-SsrB two-component system

PLoS genetics, 2010-03, Vol.6 (3), p.e1000875-e1000875

2010

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PSORT-B: Improving protein subcellular localization prediction for Gram-negative bacteria

Nucleic acids research, 2003-07, Vol.31 (13), p.3613-3617

2003

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A statistical approach to high-throughput screening of predicted orthologs

Computational statistics & data analysis, 2011, Vol.55 (1), p.935-943

2011

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FUNCTION OF PSEUDOMONAS PORINS IN UPTAKE AND EFFLUX

Annual review of microbiology, 2002-01, Vol.56 (1), p.17-38

2002

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Computer-aided biotechnology: from immuno-informatics to reverse vaccinology

Trends in biotechnology (Regular ed.), 2008-04, Vol.26 (4), p.190-200

2008

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Avian beta-defensin nomenclature: A community proposed update

Immunology letters, 2007-05, Vol.110 (1), p.86-89

2007

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Construction of a mini-Tn5-luxCDABE mutant library in Pseudomonas aeruginosa PAO1: a tool for identifying differentially regulated genes

Genome research, 2005-04, Vol.15 (4), p.583

2005

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Improved genomic island predictions with IslandPath-DIMOB

Bioinformatics, 2018-07, Vol.34 (13), p.2161-2167

2018

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Identification of 526 conserved metazoan genetic innovations exposes a new role for cofactor E-like in neuronal microtubule homeostasis

PLoS genetics, 2013-10, Vol.9 (10), p.e1003804-e1003804

2013

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IslandViewer 4: expanded prediction of genomic islands for larger-scale datasets

Nucleic acids research, 2017-07, Vol.45 (W1), p.W30-W35

2017

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IslandViewer 3: more flexible, interactive genomic island discovery, visualization and analysis: Figure 1

Nucleic acids research, 2015-07, Vol.43 (W1), p.W104-W108

2015

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CARD 2017: expansion and model-centric curation of the comprehensive antibiotic resistance database

Nucleic acids research, 2017-01, Vol.45 (D1), p.D566-D573

2017

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Whole-Genome Sequencing and Social-Network Analysis of a Tuberculosis Outbreak

The use of prescription medications and non-prescription medications during lactation in a prospective Canadian cohort study

Pathway-GPS and SIGORA: identifying relevant pathways based on the over-representation of their gene-pair signatures

Detecting genomic islands using bioinformatics approaches

PSORTdb: expanding the bacteria and archaea protein subcellular localization database to better reflect diversity in cell envelope structures

Disruption of the Gut Microbiota With Antibiotics Exacerbates Acute Vascular Rejection

Pseudomonas Genome Database: facilitating user-friendly, comprehensive comparisons of microbial genomes

Newly introduced genomic prophage islands are critical determinants of in vivo competitiveness in the Liverpool Epidemic Strain of Pseudomonas aeruginosa

Raloxifene attenuates Pseudomonas aeruginosa pyocyanin production and virulence

Enabling a systems biology approach to immunology: focus on innate immunity

PSORTdb--an expanded, auto-updated, user-friendly protein subcellular localization database for Bacteria and Archaea

proportional lack of archaeal pathogens: Do viruses/phages hold the key

Pathogen-associated gene discovery workflows for novel antivirulence therapeutic development

Identification of the regulatory logic controlling Salmonella pathoadaptation by the SsrA-SsrB two-component system

PSORT-B: Improving protein subcellular localization prediction for Gram-negative bacteria

A statistical approach to high-throughput screening of predicted orthologs

FUNCTION OF PSEUDOMONAS PORINS IN UPTAKE AND EFFLUX

Computer-aided biotechnology: from immuno-informatics to reverse vaccinology

Avian beta-defensin nomenclature: A community proposed update

Construction of a mini-Tn5-luxCDABE mutant library in Pseudomonas aeruginosa PAO1: a tool for identifying differentially regulated genes

Improved genomic island predictions with IslandPath-DIMOB

Identification of 526 conserved metazoan genetic innovations exposes a new role for cofactor E-like in neuronal microtubule homeostasis

IslandViewer 4: expanded prediction of genomic islands for larger-scale datasets

IslandViewer 3: more flexible, interactive genomic island discovery, visualization and analysis: Figure 1

CARD 2017: expansion and model-centric curation of the comprehensive antibiotic resistance database

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