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Modeling of Tumor Growth Incorporating the Effects of Necrosis and the Effect of Bevacizumab

Complexity (New York, N.Y.), 2017-01, Vol.2017 (2017), p.1-10

2017

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Simulations of tumor growth and response to immunotherapy by coupling a spatial agent-based model with a whole-patient quantitative systems pharmacology model

PLoS computational biology, 2022-07, Vol.18 (7), p.e1010254

2022

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A seven‐step guide to spatial, agent‐based modelling of tumour evolution

Evolutionary applications, 2024-05, Vol.17 (5), p.e13687-n/a

2024

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Using birth-death processes to infer tumor subpopulation structure from live-cell imaging drug screening data

PLoS computational biology, 2024-03, Vol.20 (3), p.e1011888-e1011888

2024

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Integrated computational and in vivo models reveal Key Insights into macrophage behavior during bone healing

PLoS computational biology, 2022-05, Vol.18 (5), p.e1009839-e1009839

2022

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An Integrated Computational Model of the Bone Microenvironment in Bone-Metastatic Prostate Cancer

Cancer research (Chicago, Ill.), 2014-05, Vol.74 (9), p.2391-2401

2014

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Computational modeling reveals a key role for polarized myeloid cells in controlling osteoclast activity during bone injury repair

Scientific reports, 2021-03, Vol.11 (1), p.6055-6055, Article 6055

2021

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Hybrid Automata Library: A flexible platform for hybrid modeling with real-time visualization

PLoS computational biology, 2020-03, Vol.16 (3), p.e1007635-e1007635

2020

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A survey of open questions in adaptive therapy: Bridging mathematics and clinical translation

eLife, 2023-03, Vol.12

2023

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Exploiting Evolution To Treat Drug Resistance: Combination Therapy and the Double Bind

Molecular pharmaceutics, 2012-04, Vol.9 (4), p.914-921

2012

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The bone ecosystem facilitates multiple myeloma relapse and the evolution of heterogeneous drug resistant disease

Nature communications, 2024-03, Vol.15 (1), p.2458-2458, Article 2458

2024

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Evolutionary emergence of angiogenesis in avascular tumors using a spatial public goods game

PloS one, 2017-04, Vol.12 (4), p.e0175063-e0175063

2017

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Selection-driven tumor evolution with public goods leads to patterns of clonal expansion consistent with neutral growth

iScience, 2021-01, Vol.24 (1), p.101901-101901, Article 101901

2021

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What Is the Storage Effect, Why Should It Occur in Cancers, and How Can It Inform Cancer Therapy?

Cancer control, 2020-07, Vol.27 (3), p.1073274820941968

2020

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The Evolutionary Ecology of Dormancy in Nature and in Cancer

Frontiers in ecology and evolution, 2021-07, Vol.9

2021

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Evolutionary game theory: molecules as players

Molecular bioSystems, 2014-12, Vol.1 (12), p.366-374

2014

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Invasion and proliferation kinetics in enhancing gliomas predict IDH1 mutation status

Neuro-oncology (Charlottesville, Va.), 2014-06, Vol.16 (6), p.779-786

2014

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Preconditioning-Like Properties of Short-Term Hypothermia in Isolated Perfused Rat Liver (IPRL) System

International journal of molecular sciences, 2018-03, Vol.19 (4), p.1023

2018

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A Network Biology Approach Identifies Molecular Cross-Talk between Normal Prostate Epithelial and Prostate Carcinoma Cells

PLoS computational biology, 2016-04, Vol.12 (4), p.e1004884-e1004884

2016

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Bifurcation mechanism design: From optimal flat taxes to better cancer treatments

Games, 2018-06, Vol.9 (2), p.1-38

2018

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Microenvironmental variables must influence intrinsic phenotypic parameters of cancer stem cells to affect tumourigenicity

PLoS computational biology, 2014-01, Vol.10 (1), p.e1003433

2014

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Coexistence of “Cream Skimmer” and “Crumb Picker” Phenotypes in Nature and in Cancer

Frontiers in ecology and evolution, 2021-09, Vol.9

2021

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IDENTIFICATION AND CLASSIFICATION OF MORPHOLOGICAL PHENOTYPES IN NATURE AND IN CANCER

Journal of pathology informatics, 2022, Vol.13, p.100056, Article 100056

2022

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The evolution of robust development and homeostasis in artificial organisms

PLoS computational biology, 2008-03, Vol.4 (3), p.e1000030-e1000030

2008

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Fractionated follow-up chemotherapy delays the onset of resistance in bone metastatic prostate cancer

Games, 2018-06, Vol.9 (2), p.1-10

2018

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Modeling of Tumor Growth Incorporating the Effects of Necrosis and the Effect of Bevacizumab

Simulations of tumor growth and response to immunotherapy by coupling a spatial agent-based model with a whole-patient quantitative systems pharmacology model

A seven‐step guide to spatial, agent‐based modelling of tumour evolution

Using birth-death processes to infer tumor subpopulation structure from live-cell imaging drug screening data

Integrated computational and in vivo models reveal Key Insights into macrophage behavior during bone healing

An Integrated Computational Model of the Bone Microenvironment in Bone-Metastatic Prostate Cancer

Computational modeling reveals a key role for polarized myeloid cells in controlling osteoclast activity during bone injury repair

Hybrid Automata Library: A flexible platform for hybrid modeling with real-time visualization

A survey of open questions in adaptive therapy: Bridging mathematics and clinical translation

Exploiting Evolution To Treat Drug Resistance: Combination Therapy and the Double Bind

The bone ecosystem facilitates multiple myeloma relapse and the evolution of heterogeneous drug resistant disease

Evolutionary emergence of angiogenesis in avascular tumors using a spatial public goods game

Selection-driven tumor evolution with public goods leads to patterns of clonal expansion consistent with neutral growth

What Is the Storage Effect, Why Should It Occur in Cancers, and How Can It Inform Cancer Therapy?

The Evolutionary Ecology of Dormancy in Nature and in Cancer

Evolutionary game theory: molecules as players

Invasion and proliferation kinetics in enhancing gliomas predict IDH1 mutation status

Preconditioning-Like Properties of Short-Term Hypothermia in Isolated Perfused Rat Liver (IPRL) System

A Network Biology Approach Identifies Molecular Cross-Talk between Normal Prostate Epithelial and Prostate Carcinoma Cells

Bifurcation mechanism design: From optimal flat taxes to better cancer treatments

Microenvironmental variables must influence intrinsic phenotypic parameters of cancer stem cells to affect tumourigenicity

Coexistence of “Cream Skimmer” and “Crumb Picker” Phenotypes in Nature and in Cancer

IDENTIFICATION AND CLASSIFICATION OF MORPHOLOGICAL PHENOTYPES IN NATURE AND IN CANCER

The evolution of robust development and homeostasis in artificial organisms

Fractionated follow-up chemotherapy delays the onset of resistance in bone metastatic prostate cancer

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