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xCell: digitally portraying the tissue cellular heterogeneity landscape

Genome Biology, 2017-11, Vol.18 (1), p.220-220, Article 220

2017

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Ten years of pathway analysis: current approaches and outstanding challenges

PLoS computational biology, 2012-02, Vol.8 (2), p.e1002375-e1002375

2012

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Comprehensive analysis of normal adjacent to tumor transcriptomes

Nature communications, 2017-10, Vol.8 (1), p.1077-14, Article 1077

2017

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Reference-based analysis of lung single-cell sequencing reveals a transitional profibrotic macrophage

Nature immunology, 2019-02, Vol.20 (2), p.163-172

2019

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Prototype of running clinical trials in an untrustworthy environment using blockchain

Nature communications, 2019-02, Vol.10 (1), p.917-917, Article 917

2019

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Variation in the Human Immune System Is Largely Driven by Non-Heritable Influences

Cell, 2015-01, Vol.160 (1-2), p.37-47

2015

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An Environment-Wide Association Study (EWAS) on type 2 diabetes mellitus

PloS one, 2010-05, Vol.5 (5), p.e10746

2010

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A survey of current trends in computational drug repositioning

Briefings in bioinformatics, 2016-01, Vol.17 (1), p.2-12

2016

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Robust meta-analysis of gene expression using the elastic net

Nucleic acids research, 2015-07, Vol.43 (12), p.e79-e79

2015

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Compendium of Immune Signatures Identifies Conserved and Species-Specific Biology in Response to Inflammation

Immunity (Cambridge, Mass.), 2016-01, Vol.44 (1), p.194-206

2016

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Minimum information about clinical artificial intelligence modeling: the MI-CLAIM checklist

Nature medicine, 2020-09, Vol.26 (9), p.1320-1324

2020

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Integrating biomedical research and electronic health records to create knowledge-based biologically meaningful machine-readable embeddings

Nature communications, 2019-07, Vol.10 (1), p.3045-10, Article 3045

2019

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Application of Machine Learning for Cytometry Data

Frontiers in immunology, 2022-01, Vol.12, p.787574-787574

2022

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Characteristics and challenges of the clinical pipeline of digital therapeutics

NPJ digital medicine, 2020-12, Vol.3 (1), p.159-5, Article 159

2020

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Network-based elucidation of human disease similarities reveals common functional modules enriched for pluripotent drug targets

PLoS computational biology, 2010-02, Vol.6 (2), p.e1000662-e1000662

2010

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ImmPort, toward repurposing of open access immunological assay data for translational and clinical research

Scientific data, 2018-02, Vol.5 (1), p.180015-180015, Article 180015

2018

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Reversal of cancer gene expression correlates with drug efficacy and reveals therapeutic targets

Nature communications, 2017-07, Vol.8 (1), p.16022-16022, Article 16022

2017

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Identification of antiviral antihistamines for COVID-19 repurposing

Biochemical and biophysical research communications, 2021-01, Vol.538, p.173-179

2021

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Performance comparison of exome DNA sequencing technologies

Nature biotechnology, 2011-10, Vol.29 (10), p.908-914

2011

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Discovery and preclinical validation of drug indications using compendia of public gene expression data

Science translational medicine, 2011-08, Vol.3 (96), p.96ra77

2011

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Systematic pan-cancer analysis of tumour purity

Nature communications, 2015-12, Vol.6 (1), p.8971-8971, Article 8971

2015

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Scalable and accurate deep learning with electronic health records

NPJ digital medicine, 2018-12, Vol.1 (1), p.18-10, Article 18

2018

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Systematic identification of ACE2 expression modulators reveals cardiomyopathy as a risk factor for mortality in COVID-19 patients

Genome Biology, 2022-01, Vol.23 (1), p.15-15, Article 15

2022

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Computational repositioning of the anticonvulsant topiramate for inflammatory bowel disease

Science translational medicine, 2011-08, Vol.3 (96), p.96ra76

2011

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Anti-CD44 antibody treatment lowers hyperglycemia and improves insulin resistance, adipose inflammation, and hepatic steatosis in diet-induced obese mice

Diabetes (New York, N.Y.), 2015-03, Vol.64 (3), p.867-875

2015

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xCell: digitally portraying the tissue cellular heterogeneity landscape

Ten years of pathway analysis: current approaches and outstanding challenges

Comprehensive analysis of normal adjacent to tumor transcriptomes

Reference-based analysis of lung single-cell sequencing reveals a transitional profibrotic macrophage

Prototype of running clinical trials in an untrustworthy environment using blockchain

Variation in the Human Immune System Is Largely Driven by Non-Heritable Influences

An Environment-Wide Association Study (EWAS) on type 2 diabetes mellitus

A survey of current trends in computational drug repositioning

Robust meta-analysis of gene expression using the elastic net

Compendium of Immune Signatures Identifies Conserved and Species-Specific Biology in Response to Inflammation

Minimum information about clinical artificial intelligence modeling: the MI-CLAIM checklist

Integrating biomedical research and electronic health records to create knowledge-based biologically meaningful machine-readable embeddings

Application of Machine Learning for Cytometry Data

Characteristics and challenges of the clinical pipeline of digital therapeutics

Network-based elucidation of human disease similarities reveals common functional modules enriched for pluripotent drug targets

ImmPort, toward repurposing of open access immunological assay data for translational and clinical research

Reversal of cancer gene expression correlates with drug efficacy and reveals therapeutic targets

Identification of antiviral antihistamines for COVID-19 repurposing

Performance comparison of exome DNA sequencing technologies

Discovery and preclinical validation of drug indications using compendia of public gene expression data

Systematic pan-cancer analysis of tumour purity

Scalable and accurate deep learning with electronic health records

Systematic identification of ACE2 expression modulators reveals cardiomyopathy as a risk factor for mortality in COVID-19 patients

Computational repositioning of the anticonvulsant topiramate for inflammatory bowel disease

Anti-CD44 antibody treatment lowers hyperglycemia and improves insulin resistance, adipose inflammation, and hepatic steatosis in diet-induced obese mice

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