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Context-dependent control of alternative splicing by RNA-binding proteins

Nature reviews. Genetics, 2014-10, Vol.15 (10), p.689-701

2014

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The splicing regulator Rbfox1 (A2BP1) controls neuronal excitation in the mammalian brain

Nature genetics, 2011-07, Vol.43 (7), p.706-711

2011

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RBPmap: a web server for mapping binding sites of RNA-binding proteins

Nucleic acids research, 2014-07, Vol.42 (W1), p.W361-W367

2014

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Intron lariat spliceosomes convert lariats to true circles: implications for intron transposition

Genes & development, 2024-04, Vol.38 (7-8), p.322-335

2024

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A post-transcriptional regulatory switch in polypyrimidine tract-binding proteins reprograms alternative splicing in developing neurons

Genes & development, 2007-07, Vol.21 (13), p.1636-1652

2007

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Distinct and shared functions of ALS-associated proteins TDP-43, FUS and TAF15 revealed by multisystem analyses

Nature communications, 2016-07, Vol.7 (1), p.12143-12143, Article 12143

2016

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RBPmap: a web server for mapping binding sites of RNA-binding proteins

Nucleic acids research, 2014-07, Vol.42 (Web Server issue), p.W361

2014

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Synthesis of modified nucleotide polymers by the poly(U) polymerase Cid1: application to direct RNA sequencing on nanopores

RNA (Cambridge), 2021-12, Vol.27 (12), p.1497-1511

2021

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Competition between Pre-mRNAs for the Splicing Machinery Drives Global Regulation of Splicing

Molecular cell, 2013-08, Vol.51 (3), p.338-348

2013

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The UCSC SARS-CoV-2 Genome Browser

Nature genetics, 2020-10, Vol.52 (10), p.991-998

2020

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Methylene-Linked Bis-NHC Half-Sandwich Ruthenium Complexes: Binding of Small Molecules and Catalysis toward Ketone Transfer Hydrogenation

Organometallics, 2021-03, Vol.40 (6), p.792-803

2021

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Genomewide Analysis of mRNA Processing in Yeast Using Splicing-Specific Microarrays

Science (American Association for the Advancement of Science), 2002-05, Vol.296 (5569), p.907-910

2002

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Aberrant alternative splicing and extracellular matrix gene expression in mouse models of myotonic dystrophy

Nature structural & molecular biology, 2010-02, Vol.17 (2), p.187-193

2010

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Evolution of ColE1-like plasmids across γ-Proteobacteria: From bacteriocin production to antimicrobial resistance

PLoS genetics, 2021-11, Vol.17 (11), p.e1009919-e1009919

2021

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Broad variation in response of individual introns to splicing inhibitors in a humanized yeast strain

RNA (Cambridge), 2024-02, Vol.30 (2), p.149-170

2024

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Human cells contain myriad excised linear intron RNAs with links to gene regulation and potential utility as biomarkers

PLoS genetics, 2024-09, Vol.20 (9), p.e1011416

2024

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Correction: Rapidly evolving protointrons in Saccharomyces genomes revealed by a hungry spliceosome

PLoS genetics, 2020-05, Vol.16 (5), p.e1008854-e1008854

2020

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Ultraconserved elements are associated with homeostatic control of splicing regulators by alternative splicing and nonsense-mediated decay

Genes & development, 2007-03, Vol.21 (6), p.708-718

2007

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The splicing regulator Rbfox2 is required for both cerebellar development and mature motor function

Genes & development, 2012-03, Vol.26 (5), p.445-460

2012

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An RNA gene expressed during cortical development evolved rapidly in humans

Nature, 2006-09, Vol.443 (7108), p.167-172

2006

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Rearrangement of competing U2 RNA helices within the spliceosome promotes multiple steps in splicing

Genes & development, 2007-04, Vol.21 (7), p.811-820

2007

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Autogenous cross-regulation of Quaking mRNA processing and translation balances Quaking functions in splicing and translation

Genes & development, 2017-09, Vol.31 (18), p.1894-1909

2017

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Muscleblind-like 2-Mediated Alternative Splicing in the Developing Brain and Dysregulation in Myotonic Dystrophy

Neuron (Cambridge, Mass.), 2012-08, Vol.75 (3), p.437-450

2012

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Protein-RNA Networks Regulated by Normal and ALS-Associated Mutant HNRNPA2B1 in the Nervous System

Neuron (Cambridge, Mass.), 2016-11, Vol.92 (4), p.780-795

2016

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Integrative Genome-wide Analysis Reveals Cooperative Regulation of Alternative Splicing by hnRNP Proteins

Cell reports (Cambridge), 2012-02, Vol.1 (2), p.167-178

2012

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Context-dependent control of alternative splicing by RNA-binding proteins

The splicing regulator Rbfox1 (A2BP1) controls neuronal excitation in the mammalian brain

RBPmap: a web server for mapping binding sites of RNA-binding proteins

Intron lariat spliceosomes convert lariats to true circles: implications for intron transposition

A post-transcriptional regulatory switch in polypyrimidine tract-binding proteins reprograms alternative splicing in developing neurons

Distinct and shared functions of ALS-associated proteins TDP-43, FUS and TAF15 revealed by multisystem analyses

RBPmap: a web server for mapping binding sites of RNA-binding proteins

Synthesis of modified nucleotide polymers by the poly(U) polymerase Cid1: application to direct RNA sequencing on nanopores

Competition between Pre-mRNAs for the Splicing Machinery Drives Global Regulation of Splicing

The UCSC SARS-CoV-2 Genome Browser

Methylene-Linked Bis-NHC Half-Sandwich Ruthenium Complexes: Binding of Small Molecules and Catalysis toward Ketone Transfer Hydrogenation

Genomewide Analysis of mRNA Processing in Yeast Using Splicing-Specific Microarrays

Aberrant alternative splicing and extracellular matrix gene expression in mouse models of myotonic dystrophy

Evolution of ColE1-like plasmids across γ-Proteobacteria: From bacteriocin production to antimicrobial resistance

Broad variation in response of individual introns to splicing inhibitors in a humanized yeast strain

Human cells contain myriad excised linear intron RNAs with links to gene regulation and potential utility as biomarkers

Correction: Rapidly evolving protointrons in Saccharomyces genomes revealed by a hungry spliceosome

Ultraconserved elements are associated with homeostatic control of splicing regulators by alternative splicing and nonsense-mediated decay

The splicing regulator Rbfox2 is required for both cerebellar development and mature motor function

An RNA gene expressed during cortical development evolved rapidly in humans

Rearrangement of competing U2 RNA helices within the spliceosome promotes multiple steps in splicing

Autogenous cross-regulation of Quaking mRNA processing and translation balances Quaking functions in splicing and translation

Muscleblind-like 2-Mediated Alternative Splicing in the Developing Brain and Dysregulation in Myotonic Dystrophy

Protein-RNA Networks Regulated by Normal and ALS-Associated Mutant HNRNPA2B1 in the Nervous System

Integrative Genome-wide Analysis Reveals Cooperative Regulation of Alternative Splicing by hnRNP Proteins

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