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Structure is three to ten times more conserved than sequence-A study of structural response in protein cores

Proteins, structure, function, and bioinformatics, 2009-11, Vol.77 (3), p.499-508

2009

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Targeting tRNA-synthetase interactions towards novel therapeutic discovery against eukaryotic pathogens

PLoS neglected tropical diseases, 2020-02, Vol.14 (2), p.e0007983

2020

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Computational analysis of tRNA identity

FEBS letters, 2010-01, Vol.584 (2), p.325-333

Ardell, David H.

2010

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Prediction of regulatory targets of alternative isoforms of the epidermal growth factor receptor in a glioblastoma cell line

BMC bioinformatics, 2019-08, Vol.20 (1), p.434-434, Article 434

2019

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tRNA functional signatures classify plastids as late-branching cyanobacteria

BMC ecology and evolution, 2019-12, Vol.19 (1), p.224, Article 224

2019

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Eye movements during listening reveal spontaneous grammatical processing

Frontiers in psychology, 2014-05, Vol.5, p.410-410

2014

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Dynamic regulation of mRNA decay during neural development

Neural development, 2015-04, Vol.10 (1), p.11-11, Article 11

2015

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Structural and Genetic Determinants of Convergence in the Drosophila tRNA Structure–Function Map

Journal of molecular evolution, 2021-02, Vol.89 (1-2), p.103-116

2021

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The Louse-Borne Human Pathogen Bartonella quintana Is a Genomic Derivative of the Zoonotic Agent Bartonella henselae

Proceedings of the National Academy of Sciences - PNAS, 2004-06, Vol.101 (26), p.9716-9721

2004

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tRNA signatures reveal a polyphyletic origin of SAR11 strains among alphaproteobacteria

PLoS computational biology, 2014-02, Vol.10 (2), p.e1003454-e1003454

2014

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FAST: FAST Analysis of Sequences Toolbox

Frontiers in genetics, 2015-05, Vol.6, p.172-172

2015

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tSFM 1.0: tRNA Structure–Function Mapper

Bioinformatics (Oxford, England), 2021-10, Vol.37 (20), p.3654-3656

2021

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Match fitness landscapes for macromolecular interaction networks: Selection for translational accuracy and rate can displace tRNA-binding interfaces of non-cognate aminoacyl-tRNA synthetases

Theoretical population biology, 2019-10, Vol.129, p.68-80

2019

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SNP‐SVant: A Computational Workflow to Predict and Annotate Genomic Variants in Organisms Lacking Benchmarked Variants

Current protocols, 2024-05, Vol.4 (5), p.e1046-n/a

2024

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Initiator tRNA genes template the 3' CCA end at high frequencies in bacteria

BMC genomics, 2016-12, Vol.17 (1), p.1003-1003, Article 1003

2016

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No accident: genetic codes freeze in error-correcting patterns of the standard genetic code

Philosophical transactions of the Royal Society of London. Series B. Biological sciences, 2002-11, Vol.357 (1427), p.1625-1642

2002

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Influences on gene expression in vivo by a Shine–Dalgarno sequence

Molecular microbiology, 2006-04, Vol.60 (2), p.480-492

2006

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The coevolution of genes and genetic codes: Crick's frozen accident revisited

Journal of molecular evolution, 2006-09, Vol.63 (3), p.297-313

2006

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CMCpy: Genetic Code-Message Coevolution Models in Python

Evolutionary Bioinformatics, 2013-01, Vol.2013 (2013), p.111-125

2013

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TFAM detects co-evolution of tRNA identity rules with lateral transfer of histidyl-tRNA synthetase

Nucleic acids research, 2006-01, Vol.34 (3), p.893-904

2006

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Transient Erythromycin Resistance Phenotype Associated with Peptidyl-tRNA Drop-Off on Early UGG and GGG Codons

Journal of Bacteriology, 2007-12, Vol.189 (24), p.8993-9000

2007

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TFAM 1.0: an online tRNA function classifier

Nucleic acids research, 2007-07, Vol.35 (Web Server issue), p.W350-W353

2007

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Whole RNA-Sequencing and Transcriptome Assembly of Candida albicans and Candida africana under Chlamydospore-Inducing Conditions

Genome biology and evolution, 2017-07, Vol.9 (7), p.1971-1977

2017

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Intron Evolution and Information processing in the DNA polymerase alpha gene in spirotrichous ciliates: a hypothesis for interconversion between DNA and RNA deletion

Biology direct, 2007-02, Vol.2 (1), p.6-6

2007

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Visualizing bacterial tRNA identity determinants and antideterminants using function logos and inverse function logos

Nucleic acids research, 2006-01, Vol.34 (3), p.905-916

2006

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Structure is three to ten times more conserved than sequence-A study of structural response in protein cores

Targeting tRNA-synthetase interactions towards novel therapeutic discovery against eukaryotic pathogens

Computational analysis of tRNA identity

Prediction of regulatory targets of alternative isoforms of the epidermal growth factor receptor in a glioblastoma cell line

tRNA functional signatures classify plastids as late-branching cyanobacteria

Eye movements during listening reveal spontaneous grammatical processing

Dynamic regulation of mRNA decay during neural development

Structural and Genetic Determinants of Convergence in the Drosophila tRNA Structure–Function Map

The Louse-Borne Human Pathogen Bartonella quintana Is a Genomic Derivative of the Zoonotic Agent Bartonella henselae

tRNA signatures reveal a polyphyletic origin of SAR11 strains among alphaproteobacteria

FAST: FAST Analysis of Sequences Toolbox

tSFM 1.0: tRNA Structure–Function Mapper

Match fitness landscapes for macromolecular interaction networks: Selection for translational accuracy and rate can displace tRNA-binding interfaces of non-cognate aminoacyl-tRNA synthetases

SNP‐SVant: A Computational Workflow to Predict and Annotate Genomic Variants in Organisms Lacking Benchmarked Variants

Initiator tRNA genes template the 3' CCA end at high frequencies in bacteria

No accident: genetic codes freeze in error-correcting patterns of the standard genetic code

Influences on gene expression in vivo by a Shine–Dalgarno sequence

The coevolution of genes and genetic codes: Crick's frozen accident revisited

CMCpy: Genetic Code-Message Coevolution Models in Python

TFAM detects co-evolution of tRNA identity rules with lateral transfer of histidyl-tRNA synthetase

Transient Erythromycin Resistance Phenotype Associated with Peptidyl-tRNA Drop-Off on Early UGG and GGG Codons

TFAM 1.0: an online tRNA function classifier

Whole RNA-Sequencing and Transcriptome Assembly of Candida albicans and Candida africana under Chlamydospore-Inducing Conditions

Intron Evolution and Information processing in the DNA polymerase alpha gene in spirotrichous ciliates: a hypothesis for interconversion between DNA and RNA deletion

Visualizing bacterial tRNA identity determinants and antideterminants using function logos and inverse function logos

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