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Structural, kinetic and proteomic characterization of acetyl phosphate-dependent bacterial protein acetylation

PloS one, 2014-04, Vol.9 (4), p.e94816-e94816

2014

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Multi-laboratory assessment of reproducibility, qualitative and quantitative performance of SWATH-mass spectrometry

Nature communications, 2017-08, Vol.8 (1), p.291-12, Article 291

2017

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Protein acetylation dynamics in response to carbon overflow in Escherichia coli

Molecular microbiology, 2015-12, Vol.98 (5), p.847-863

2015

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SIRT3 and SIRT5 regulate the enzyme activity and cardiolipin binding of very long-chain acyl-CoA dehydrogenase

PloS one, 2015-03, Vol.10 (3), p.e0122297-e0122297

2015

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Sweetening the Pot: Adding Glycosylation to the Biomarker Discovery Equation

Clinical chemistry (Baltimore, Md.), 2010-02, Vol.56 (2), p.223-236

2010

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Simultaneous Quantification of the Acetylome and Succinylome by ‘One‐Pot’ Affinity Enrichment

Proteomics (Weinheim), 2018-09, Vol.18 (17), p.e1800123-n/a

2018

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Temporal dynamics of liver mitochondrial protein acetylation and succinylation and metabolites due to high fat diet and/or excess glucose or fructose

PloS one, 2018-12, Vol.13 (12), p.e0208973-e0208973

2018

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Characterization of the human heart mitochondrial proteome

Nature biotechnology, 2003-03, Vol.21 (3), p.281-286

2003

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Identification and characterization of AckA-dependent protein acetylation in Neisseria gonorrhoeae

PloS one, 2017-06, Vol.12 (6), p.e0179621-e0179621

2017

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Proteomic analysis of Neisseria gonorrhoeae biofilms shows shift to anaerobic respiration and changes in nutrient transport and outermembrane proteins

PloS one, 2012-06, Vol.7 (6), p.e38303-e38303

2012

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Phosphospecific proteolysis for mapping sites of protein phosphorylation

Nature biotechnology, 2003-09, Vol.21 (9), p.1047-1054

2003

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MS2Assign, automated assignment and nomenclature of tandem mass spectra of chemically crosslinked peptides

Journal of the American Society for Mass Spectrometry, 2003-08, Vol.14 (8), p.834-850

2003

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PIQED: automated identification and quantification of protein modifications from DIA-MS data

Nature methods, 2017-07, Vol.14 (7), p.646-647

2017

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Proteome and Secretome Dynamics of Human Retinal Pigment Epithelium in Response to Reactive Oxygen Species

Scientific reports, 2019-10, Vol.9 (1), p.15440-12, Article 15440

2019

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Multiplexed, Scheduled, High-Resolution Parallel Reaction Monitoring on a Full Scan QqTOF Instrument with Integrated Data-Dependent and Targeted Mass Spectrometric Workflows

Analytical chemistry (Washington), 2015-10, Vol.87 (20), p.10222-10229

2015

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Proteomic analysis of plasma membrane and secretory vesicles from human neutrophils

Proteome science, 2007-08, Vol.5 (1), p.12-12, Article 12

2007

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Quantification of Lysine Acetylation and Succinylation Stoichiometry in Proteins Using Mass Spectrometric Data-Independent Acquisitions (SWATH)

Journal of the American Society for Mass Spectrometry, 2016-11, Vol.27 (11), p.1758-1771

2016

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Analysis of peptides and proteins containing nitrotyrosine by matrix-assisted laser desorption/ionization mass spectrometry

Journal of the American Society for Mass Spectrometry, 2001-04, Vol.12 (4), p.439-448

2001

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N-acylethanolamine signalling mediates the effect of diet on lifespan in Caenorhabditis elegans

Nature (London), 2011-05, Vol.473 (7346), p.226-229

2011

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An acetylatable lysine controls CRP function in E. coli

Molecular microbiology, 2018-01, Vol.107 (1), p.116-131

2018

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Structural studies of the scrapie prion protein using mass spectrometry and amino acid sequencing

Biochemistry (Easton), 1993-03, Vol.32 (8), p.1991-2002

1993

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The E. coli sirtuin CobB shows no preference for enzymatic and nonenzymatic lysine acetylation substrate sites

MicrobiologyOpen (Weinheim), 2015-02, Vol.4 (1), p.66-83

2015

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Comparative analyses of proteins from Haemophilus influenzae biofilm and planktonic populations using metabolic labeling and mass spectrometry

BMC microbiology, 2014-12, Vol.14 (1), p.329-329, Article 329

2014

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Variation and quantification among a target set of phosphopeptides in human plasma by multiple reaction monitoring and SWATH-MS2 data-independent acquisition

Electrophoresis, 2014-12, Vol.35 (24), p.3487-3497

2014

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Proteogenomics of synaptosomal mitochondrial oxidative stress

Free radical biology & medicine, 2012-09, Vol.53 (5), p.1048-1060

2012

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Structural, kinetic and proteomic characterization of acetyl phosphate-dependent bacterial protein acetylation

Multi-laboratory assessment of reproducibility, qualitative and quantitative performance of SWATH-mass spectrometry

Protein acetylation dynamics in response to carbon overflow in Escherichia coli

SIRT3 and SIRT5 regulate the enzyme activity and cardiolipin binding of very long-chain acyl-CoA dehydrogenase

Sweetening the Pot: Adding Glycosylation to the Biomarker Discovery Equation

Simultaneous Quantification of the Acetylome and Succinylome by ‘One‐Pot’ Affinity Enrichment

Temporal dynamics of liver mitochondrial protein acetylation and succinylation and metabolites due to high fat diet and/or excess glucose or fructose

Characterization of the human heart mitochondrial proteome

Identification and characterization of AckA-dependent protein acetylation in Neisseria gonorrhoeae

Proteomic analysis of Neisseria gonorrhoeae biofilms shows shift to anaerobic respiration and changes in nutrient transport and outermembrane proteins

Phosphospecific proteolysis for mapping sites of protein phosphorylation

MS2Assign, automated assignment and nomenclature of tandem mass spectra of chemically crosslinked peptides

PIQED: automated identification and quantification of protein modifications from DIA-MS data

Proteome and Secretome Dynamics of Human Retinal Pigment Epithelium in Response to Reactive Oxygen Species

Multiplexed, Scheduled, High-Resolution Parallel Reaction Monitoring on a Full Scan QqTOF Instrument with Integrated Data-Dependent and Targeted Mass Spectrometric Workflows

Proteomic analysis of plasma membrane and secretory vesicles from human neutrophils

Quantification of Lysine Acetylation and Succinylation Stoichiometry in Proteins Using Mass Spectrometric Data-Independent Acquisitions (SWATH)

Analysis of peptides and proteins containing nitrotyrosine by matrix-assisted laser desorption/ionization mass spectrometry

N-acylethanolamine signalling mediates the effect of diet on lifespan in Caenorhabditis elegans

An acetylatable lysine controls CRP function in E. coli

Structural studies of the scrapie prion protein using mass spectrometry and amino acid sequencing

The E. coli sirtuin CobB shows no preference for enzymatic and nonenzymatic lysine acetylation substrate sites

Comparative analyses of proteins from Haemophilus influenzae biofilm and planktonic populations using metabolic labeling and mass spectrometry

Variation and quantification among a target set of phosphopeptides in human plasma by multiple reaction monitoring and SWATH-MS2 data-independent acquisition

Proteogenomics of synaptosomal mitochondrial oxidative stress

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