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The Bacterial Mobile Resistome Transfer Network Connecting the Animal and Human Microbiomes

Applied and environmental microbiology, 2016-11, Vol.82 (22), p.6672-6681

2016

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A Genomic View of Lactobacilli and Pediococci Demonstrates that Phylogeny Matches Ecology and Physiology

Applied and Environmental Microbiology, 2015-10, Vol.81 (20), p.7233-7243

2015

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Horizontal Gene Transfer as an Indispensable Driver for Evolution of Neocallimastigomycota into a Distinct Gut-Dwelling Fungal Lineage

Applied and environmental microbiology, 2019-08, Vol.85 (15), p.1

2019

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Use of adaptive laboratory evolution to discover key mutations enabling rapid growth of Escherichia coli K-12 MG1655 on glucose minimal medium

Applied and Environmental Microbiology, 2015-01, Vol.81 (1), p.17-30

2015

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Emergence of a Plant Pathogen in Europe Associated with Multiple Intercontinental Introductions

Applied and environmental microbiology, 2020-01, Vol.86 (3), p.1

2020

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Comparative Genomics of Rumen Butyrivibrio spp. Uncovers a Continuum of Polysaccharide-Degrading Capabilities

Applied and environmental microbiology, 2019-12, Vol.86 (1)

2019

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Phylogenetic Distribution of Potential Cellulases in Bacteria

Applied and Environmental Microbiology, 2013-03, Vol.79 (5), p.1545-1554

2013

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Genomic Comparisons of Lactobacillus crispatus and Lactobacillus iners Reveal Potential Ecological Drivers of Community Composition in the Vagina

Applied and environmental microbiology, 2016-12, Vol.82 (24), p.7063-7073

2016

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Genomic potential for polysaccharide deconstruction in bacteria

Applied and Environmental Microbiology, 2015-02, Vol.81 (4), p.1513-1519

2015

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The Genome of the Anaerobic Fungus Orpinomyces sp. Strain C1A Reveals the Unique Evolutionary History of a Remarkable Plant Biomass Degrader

Applied and Environmental Microbiology, 2013-08, Vol.79 (15), p.4620-4634

2013

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Identifying Potential Mechanisms Enabling Acidophily in the Ammonia-Oxidizing Archaeon "Candidatus Nitrosotalea devanaterra"

Applied and environmental microbiology, 2016-05, Vol.82 (9), p.2608-2619

2016

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Genomic Diversity and Recombination among Xylella fastidiosa Subspecies

Applied and environmental microbiology, 2019-07, Vol.85 (13)

2019

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Prevalence of Antibiotic Resistance Genes among Human Gut-Derived Bifidobacteria

Applied and environmental microbiology, 2017-02, Vol.83 (3)

2017

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Independent Evolution with the Gene Flux Originating from Multiple Xanthomonas Species Explains Genomic Heterogeneity in Xanthomonas perforans

Applied and environmental microbiology, 2019-10, Vol.85 (20)

2019

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Three Genomes from the Phylum Acidobacteria Provide Insight into the Lifestyles of These Microorganisms in Soils

Applied and Environmental Microbiology, 2009-04, Vol.75 (7), p.2046-2056

2009

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Tracking the Taxonomy of the Genus Bifidobacterium Based on a Phylogenomic Approach

Applied and environmental microbiology, 2018-02, Vol.84 (4)

2018

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Investigation of the evolutionary development of the genus Bifidobacterium by comparative genomics

Applied and Environmental Microbiology, 2014-10, Vol.80 (20), p.6383-6394

2014

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Poultry production as the main reservoir of ciprofloxacin- and tigecycline-resistant extended-spectrum β-lactamase (ESBL)-producing Salmonella enterica serovar Kentucky ST198.2-2 causing human infections in China

Applied and environmental microbiology, 2023-09, Vol.89 (9), p.e0094423-e0094423

2023

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Comparative genomics of the niche-specific plant pathogen Streptomyces ipomoeae reveal novel genome content and organization

Applied and environmental microbiology, 2023-12, Vol.89 (12), p.e0030823-e0030823

2023

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Plasmid-free cheater cells commonly evolve during laboratory growth

Applied and environmental microbiology, 2024-04, Vol.90 (4), p.e0231123

2024

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Role of the fsr Quorum-Sensing System in Enterococcus faecalis Bloodstream Infection

Applied and environmental microbiology, 2022-12, Vol.88 (23), p.e0155122-e0155122

2022

Volltextzugriff (PDF)

Lineage-specific evolution of Aquibium , a close relative of Mesorhizobium , during habitat adaptation

Applied and environmental microbiology, 2024-03, Vol.90 (3), p.e0209123

2024

Volltextzugriff (PDF)

Using Genomes and Evolutionary Analyses to Screen for Host-Specificity and Positive Selection in the Plant Pathogen Xylella fastidiosa

Applied and environmental microbiology, 2022-09, Vol.88 (18), p.1-e0122022

2022

Volltextzugriff (PDF)

Laboratory Evolution to Alternating Substrate Environments Yields Distinct Phenotypic and Genetic Adaptive Strategies

Applied and environmental microbiology, 2017-07, Vol.83 (13)

2017

Volltextzugriff (PDF)

Diverse Durham collection phages demonstrate complex BREX defense responses

Applied and environmental microbiology, 2023-09, Vol.89 (9), p.e0062323-e0062323

2023

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The Bacterial Mobile Resistome Transfer Network Connecting the Animal and Human Microbiomes

A Genomic View of Lactobacilli and Pediococci Demonstrates that Phylogeny Matches Ecology and Physiology

Horizontal Gene Transfer as an Indispensable Driver for Evolution of Neocallimastigomycota into a Distinct Gut-Dwelling Fungal Lineage

Use of adaptive laboratory evolution to discover key mutations enabling rapid growth of Escherichia coli K-12 MG1655 on glucose minimal medium

Emergence of a Plant Pathogen in Europe Associated with Multiple Intercontinental Introductions

Comparative Genomics of Rumen Butyrivibrio spp. Uncovers a Continuum of Polysaccharide-Degrading Capabilities

Phylogenetic Distribution of Potential Cellulases in Bacteria

Genomic Comparisons of Lactobacillus crispatus and Lactobacillus iners Reveal Potential Ecological Drivers of Community Composition in the Vagina

Genomic potential for polysaccharide deconstruction in bacteria

The Genome of the Anaerobic Fungus Orpinomyces sp. Strain C1A Reveals the Unique Evolutionary History of a Remarkable Plant Biomass Degrader

Identifying Potential Mechanisms Enabling Acidophily in the Ammonia-Oxidizing Archaeon "Candidatus Nitrosotalea devanaterra"

Genomic Diversity and Recombination among Xylella fastidiosa Subspecies

Prevalence of Antibiotic Resistance Genes among Human Gut-Derived Bifidobacteria

Independent Evolution with the Gene Flux Originating from Multiple Xanthomonas Species Explains Genomic Heterogeneity in Xanthomonas perforans

Three Genomes from the Phylum Acidobacteria Provide Insight into the Lifestyles of These Microorganisms in Soils

Tracking the Taxonomy of the Genus Bifidobacterium Based on a Phylogenomic Approach

Investigation of the evolutionary development of the genus Bifidobacterium by comparative genomics

Poultry production as the main reservoir of ciprofloxacin- and tigecycline-resistant extended-spectrum β-lactamase (ESBL)-producing Salmonella enterica serovar Kentucky ST198.2-2 causing human infections in China

Comparative genomics of the niche-specific plant pathogen Streptomyces ipomoeae reveal novel genome content and organization

Plasmid-free cheater cells commonly evolve during laboratory growth

Role of the fsr Quorum-Sensing System in Enterococcus faecalis Bloodstream Infection

Lineage-specific evolution of Aquibium , a close relative of Mesorhizobium , during habitat adaptation

Using Genomes and Evolutionary Analyses to Screen for Host-Specificity and Positive Selection in the Plant Pathogen Xylella fastidiosa

Laboratory Evolution to Alternating Substrate Environments Yields Distinct Phenotypic and Genetic Adaptive Strategies

Diverse Durham collection phages demonstrate complex BREX defense responses

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