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Structural analysis of SARS-CoV-2 genome and predictions of the human interactome

Nucleic acids research, 2020-11, Vol.48 (20), p.11270-11283

2020

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DualSeqDB: the host-pathogen dual RNA sequencing database for infection processes

Nucleic acids research, 2021-01, Vol.49 (D1), p.D687-D693

2021

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A high-throughput approach to profile RNA structure

Nucleic acids research, 2017-03, Vol.45 (5), p.e35-e35

2017

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Neurodegenerative diseases: quantitative predictions of protein-RNA interactions

RNA (Cambridge), 2013-02, Vol.19 (2), p.129-140

2013

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ALS mutations in FUS cause neuronal dysfunction and death in Caenorhabditis elegans by a dominant gain-of-function mechanism

Human molecular genetics, 2012-01, Vol.21 (1), p.1-9

2012

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Quantitative predictions of protein interactions with long noncoding RNAs

Nature methods, 2017-01, Vol.14 (1), p.5-6

2017

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Prediction of protein-RNA interactions from single-cell transcriptomic data

Nucleic acids research, 2024-04, Vol.52 (6), p.e31-e31

2024

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RNA sequestration driven by amyloid formation: the alpha synuclein case

Nucleic acids research, 2023-11, Vol.51 (21), p.11466-11478

2023

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Proteome-wide observation of the phenomenon of life on the edge of solubility

Proceedings of the National Academy of Sciences - PNAS, 2020-01, Vol.117 (2), p.1015-1020

2020

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RNA as the stone guest of protein aggregation

Nucleic acids research, 2020-12, Vol.48 (21), p.11880-11889

2020

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Protein complex scaffolding predicted as a prevalent function of long non-coding RNAs

Nucleic acids research, 2018-01, Vol.46 (2), p.917-928

2018

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RNA-binding and prion domains: the Yin and Yang of phase separation

Nucleic acids research, 2020-09, Vol.48 (17), p.9491-9504

2020

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Spinal motor neuron protein supersaturation patterns are associated with inclusion body formation in ALS

Proceedings of the National Academy of Sciences - PNAS, 2017-05, Vol.114 (20), p.E3935-E3943

2017

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Design and Functional Validation of a Mutant Variant of the LncRNA HOTAIR to Counteract Snail Function in Epithelial-to-Mesenchymal Transition

Cancer research (Chicago, Ill.), 2021-01, Vol.81 (1), p.103-113

2021

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Physicochemical principles that regulate the competition between functional and dysfunctional association of proteins

Proceedings of the National Academy of Sciences - PNAS, 2009-06, Vol.106 (25), p.10159-10164

2009

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X-inactivation: quantitative predictions of protein interactions in the Xist network

Nucleic acids research, 2013-01, Vol.41 (1), p.e31-e31

2013

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Transcriptional and epigenetic characterization of a new in vitro platform to model the formation of human pharyngeal endoderm

Genome Biology, 2024-08, Vol.25 (1), p.211-39, Article 211

2024

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By the company they keep: interaction networks define the binding ability of transcription factors

Nucleic acids research, 2015-10, Vol.43 (19), p.e125-e125

2015

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Prediction of aggregation rate and aggregation‐prone segments in polypeptide sequences

Protein science, 2005-10, Vol.14 (10), p.2723-2734

2005

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The H50Q Mutation Induces a 10-fold Decrease in the Solubility of α-Synuclein

The Journal of biological chemistry, 2015-01, Vol.290 (4), p.2395-2404

2015

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Principles of self-organization in biological pathways: a hypothesis on the autogenous association of alpha-synuclein

Nucleic acids research, 2013-12, Vol.41 (22), p.9987-9998

2013

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Systematic in vivo analysis of the intrinsic determinants of amyloid Beta pathogenicity

PLoS biology, 2007-10, Vol.5 (11), p.e290

2007

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RNAct: Protein-RNA interaction predictions for model organisms with supporting experimental data

Nucleic acids research, 2019-01, Vol.47 (D1), p.D601-D606

2019

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Constitutive patterns of gene expression regulated by RNA-binding proteins

Genome biology, 2014-01, Vol.15 (1), p.R13-R13, Article R13

2014

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Structural analysis of SARS-CoV-2 genome and predictions of the human interactome

DualSeqDB: the host-pathogen dual RNA sequencing database for infection processes

A high-throughput approach to profile RNA structure

Neurodegenerative diseases: quantitative predictions of protein-RNA interactions

ALS mutations in FUS cause neuronal dysfunction and death in Caenorhabditis elegans by a dominant gain-of-function mechanism

Quantitative predictions of protein interactions with long noncoding RNAs

Prediction of protein-RNA interactions from single-cell transcriptomic data

RNA sequestration driven by amyloid formation: the alpha synuclein case

Proteome-wide observation of the phenomenon of life on the edge of solubility

RNA as the stone guest of protein aggregation

Protein complex scaffolding predicted as a prevalent function of long non-coding RNAs

RNA-binding and prion domains: the Yin and Yang of phase separation

Spinal motor neuron protein supersaturation patterns are associated with inclusion body formation in ALS

Design and Functional Validation of a Mutant Variant of the LncRNA HOTAIR to Counteract Snail Function in Epithelial-to-Mesenchymal Transition

Physicochemical principles that regulate the competition between functional and dysfunctional association of proteins

X-inactivation: quantitative predictions of protein interactions in the Xist network

Transcriptional and epigenetic characterization of a new in vitro platform to model the formation of human pharyngeal endoderm

By the company they keep: interaction networks define the binding ability of transcription factors

TGS1 impacts snRNA 3'-end processing, ameliorates survival motor neuron-dependent neurological phenotypes in vivo and prevents neurodegeneration

Prediction of aggregation rate and aggregation‐prone segments in polypeptide sequences

The H50Q Mutation Induces a 10-fold Decrease in the Solubility of α-Synuclein

Principles of self-organization in biological pathways: a hypothesis on the autogenous association of alpha-synuclein

Systematic in vivo analysis of the intrinsic determinants of amyloid Beta pathogenicity

RNAct: Protein-RNA interaction predictions for model organisms with supporting experimental data

Constitutive patterns of gene expression regulated by RNA-binding proteins

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