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Evolution of Resistance to a Last-Resort Antibiotic in Staphylococcus aureus via Bacterial Competition

Cell, 2014-08, Vol.158 (5), p.1060-1071

2014

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Grad-seq guides the discovery of ProQ as a major small RNA-binding protein

Proceedings of the National Academy of Sciences - PNAS, 2016-10, Vol.113 (41), p.11591-11596

2016

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In Vivo Cleavage Map Illuminates the Central Role of RNase E in Coding and Non-coding RNA Pathways

Molecular cell, 2017-01, Vol.65 (1), p.39-51

2017

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READemption-a tool for the computational analysis of deep-sequencing-based transcriptome data

Bioinformatics, 2014-12, Vol.30 (23), p.3421-3423

2014

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Differential RNA-seq of Vibrio cholerae identifies the VqmR small RNA as a regulator of biofilm formation

Proceedings of the National Academy of Sciences - PNAS, 2015-02, Vol.112 (7), p.E766-E775

2015

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Ten simple rules for implementing electronic lab notebooks (ELNs)

PLoS computational biology, 2024-06, Vol.20 (6), p.e1012170

2024

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Grad-seq shines light on unrecognized RNA and protein complexes in the model bacterium Escherichia coli

Nucleic acids research, 2020-09, Vol.48 (16), p.9301-9319

2020

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CoLoC-seq probes the global topology of organelle transcriptomes

Nucleic acids research, 2023-02, Vol.51 (3), p.e16-e16

2023

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Functional high-throughput screening identifies the miR-15 microRNA family as cellular restriction factors for Salmonella infection

Nature communications, 2014-08, Vol.5 (1), p.4718-4718, Article 4718

2014

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The Primary Transcriptome of Barley Chloroplasts: Numerous Noncoding RNAs and the Dominating Role of the Plastid-Encoded RNA Polymerase

The Plant cell, 2012-01, Vol.24 (1), p.123-136

2012

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Gene autoregulation by 3' UTR-derived bacterial small RNAs

eLife, 2020-08, Vol.9

2020

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The induction of natural competence adapts staphylococcal metabolism to infection

Nature communications, 2022-03, Vol.13 (1), p.1525-17, Article 1525

2022

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Characterization of the transcriptome of Haloferax volcanii, grown under four different conditions, with mixed RNA-Seq

PloS one, 2019-04, Vol.14 (4), p.e0215986-e0215986

2019

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Primary transcriptome map of the hyperthermophilic archaeon Thermococcus kodakarensis

BMC genomics, 2014-08, Vol.15 (1), p.684-684

2014

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ANNOgesic: a Swiss army knife for the RNA-seq based annotation of bacterial/archaeal genomes

Gigascience, 2018-09, Vol.7 (9)

2018

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Profound impact of Hfq on nutrient acquisition, metabolism and motility in the plant pathogen Agrobacterium tumefaciens

PloS one, 2014-10, Vol.9 (10), p.e110427-e110427

2014

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Dual-RNAseq Analysis Unravels Virus-Host Interactions of MetSV and Methanosarcina mazei

Viruses, 2022-11, Vol.14 (11), p.2585

2022

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sRNA154 a newly identified regulator of nitrogen fixation in Methanosarcina mazei strain Gö1

RNA biology, 2017-11, Vol.14 (11), p.1544-1558

2017

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Genome-wide transcription start site profiling in biofilm-grown Burkholderia cenocepacia J2315

BMC genomics, 2015-10, Vol.16 (1), p.775-775, Article 775

2015

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Analysis of the Microprocessor in Dictyostelium: The Role of RbdB, a dsRNA Binding Protein

PLoS genetics, 2016-06, Vol.12 (6), p.e1006057-e1006057

2016

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Dual RNA-seq unveils noncoding RNA functions in host–pathogen interactions

Nature (London), 2016-01, Vol.529 (7587), p.496-501

2016

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Identification of Cholecystokinin by Genome-Wide Profiling as Potential Mediator of Serotonin-Dependent Behavioral Effects of Maternal Separation in the Amygdala

Frontiers in neuroscience, 2019-05, Vol.13, p.460-460

2019

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GT‐rich promoters can drive RNA pol II transcription and deposition of H2A.Z in African trypanosomes

The EMBO journal, 2017-09, Vol.36 (17), p.2581-2594

2017

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The CARF Protein MM_0565 Affects Transcription of the Casposon-Encoded cas1-solo Gene in Methanosarcina mazei Gö1

Biomolecules (Basel, Switzerland), 2020-08, Vol.10 (8), p.1161

2020

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Genome organization and DNA accessibility control antigenic variation in trypanosomes

Nature (London), 2018-11, Vol.563 (7729), p.121-125

2018

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Evolution of Resistance to a Last-Resort Antibiotic in Staphylococcus aureus via Bacterial Competition

Grad-seq guides the discovery of ProQ as a major small RNA-binding protein

In Vivo Cleavage Map Illuminates the Central Role of RNase E in Coding and Non-coding RNA Pathways

READemption-a tool for the computational analysis of deep-sequencing-based transcriptome data

Differential RNA-seq of Vibrio cholerae identifies the VqmR small RNA as a regulator of biofilm formation

Ten simple rules for implementing electronic lab notebooks (ELNs)

Grad-seq shines light on unrecognized RNA and protein complexes in the model bacterium Escherichia coli

CoLoC-seq probes the global topology of organelle transcriptomes

Functional high-throughput screening identifies the miR-15 microRNA family as cellular restriction factors for Salmonella infection

The Primary Transcriptome of Barley Chloroplasts: Numerous Noncoding RNAs and the Dominating Role of the Plastid-Encoded RNA Polymerase

Gene autoregulation by 3' UTR-derived bacterial small RNAs

The induction of natural competence adapts staphylococcal metabolism to infection

Characterization of the transcriptome of Haloferax volcanii, grown under four different conditions, with mixed RNA-Seq

Primary transcriptome map of the hyperthermophilic archaeon Thermococcus kodakarensis

ANNOgesic: a Swiss army knife for the RNA-seq based annotation of bacterial/archaeal genomes

Profound impact of Hfq on nutrient acquisition, metabolism and motility in the plant pathogen Agrobacterium tumefaciens

Dual-RNAseq Analysis Unravels Virus-Host Interactions of MetSV and Methanosarcina mazei

sRNA154 a newly identified regulator of nitrogen fixation in Methanosarcina mazei strain Gö1

Genome-wide transcription start site profiling in biofilm-grown Burkholderia cenocepacia J2315

Analysis of the Microprocessor in Dictyostelium: The Role of RbdB, a dsRNA Binding Protein

Dual RNA-seq unveils noncoding RNA functions in host–pathogen interactions

Identification of Cholecystokinin by Genome-Wide Profiling as Potential Mediator of Serotonin-Dependent Behavioral Effects of Maternal Separation in the Amygdala

GT‐rich promoters can drive RNA pol II transcription and deposition of H2A.Z in African trypanosomes

The CARF Protein MM_0565 Affects Transcription of the Casposon-Encoded cas1-solo Gene in Methanosarcina mazei Gö1

Genome organization and DNA accessibility control antigenic variation in trypanosomes

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