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The genome organization of Thermotoga maritima reflects its lifestyle

PLoS genetics, 2013-04, Vol.9 (4), p.e1003485-e1003485

2013

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VIPER: an advanced software package to support high-throughput LC-MS peptide identification

Bioinformatics, 2007-08, Vol.23 (15), p.2021-2023

2007

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Structural and functional characterization of DUF1471 domains of Salmonella proteins SrfN, YdgH/SssB, and YahO

PloS one, 2014-07, Vol.9 (7), p.e101787-e101787

2014

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Comparative omics-driven genome annotation refinement: application across Yersiniae

PloS one, 2012-03, Vol.7 (3), p.e33903-e33903

2012

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ChIP-Seq Analysis of the σE Regulon of Salmonella enterica Serovar Typhimurium Reveals New Genes Implicated in Heat Shock and Oxidative Stress Response

PloS one, 2015-09, Vol.10 (9), p.e0138466-e0138466

2015

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Phosphoproteome Profiling of Human Skin Fibroblast Cells in Response to Low- and High-Dose Irradiation

Journal of proteome research, 2006-05, Vol.5 (5), p.1252-1260

2006

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Differential Label-free Quantitative Proteomic Analysis of Shewanella oneidensis Cultured under Aerobic and Suboxic Conditions by Accurate Mass and Time Tag Approach

Molecular & cellular proteomics, 2006-04, Vol.5 (4), p.714-725

2006

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Whole proteome analysis of post-translational modifications: applications of mass-spectrometry for proteogenomic annotation

Genome Research, 2007-09, Vol.17 (9), p.1362-1377

2007

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Dynamic and Differential in Vivo Modifications of the Isoform HMGA1a and HMGA1b Chromatin Proteins

The Journal of biological chemistry, 2005-03, Vol.280 (10), p.8961-8973

2005

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Identification of Cross-Linked Peptides after Click-Based Enrichment Using Sequential Collision-Induced Dissociation and Electron Transfer Dissociation Tandem Mass Spectrometry

Analytical chemistry (Washington), 2009-07, Vol.81 (13), p.5524-5532

2009

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Xlink-Identifier: An Automated Data Analysis Platform for Confident Identifications of Chemically Cross-Linked Peptides Using Tandem Mass Spectrometry

Journal of proteome research, 2011-03, Vol.10 (3), p.923-931

2011

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Crystal Structures of the F and pSLT Plasmid TraJ N‑Terminal Regions Reveal Similar Homodimeric PAS Folds with Functional Interchangeability

Biochemistry (Easton), 2014-09, Vol.53 (36), p.5810-5819

2014

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Mixed-Isotope Labeling with LC-IMS-MS for Characterization of Protein–Protein Interactions by Chemical Cross-Linking

Journal of the American Society for Mass Spectrometry, 2013-03, Vol.24 (3), p.444-449

2013

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A multi-pronged search for a common structural motif in the secretion signal of Salmonella enterica serovar Typhimurium type III effector proteins

Molecular bioSystems, 2010-12, Vol.6 (12), p.2448-2458

2010

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Proteome-Wide Identification of Proteins and Their Modifications with Decreased Ambiguities and Improved False Discovery Rates Using Unique Sequence Tags

Analytical chemistry (Washington), 2008-03, Vol.80 (6), p.1871-1882

2008

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Characterization of macaque pulmonary fluid proteome during monkeypox infection: dynamics of host response

Molecular & cellular proteomics, 2010-12, Vol.9 (12), p.2760-2771

2010

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A Method for Investigating Protein−Protein Interactions Related to Salmonella Typhimurium Pathogenesis

Journal of proteome research, 2009-03, Vol.8 (3), p.1504-1514

2009

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New sub-family of lysozyme-like proteins shows no catalytic activity: crystallographic and biochemical study of STM3605 protein from Salmonella Typhimurium

Journal of structural and functional genomics, 2013-03, Vol.14 (1), p.1-10

2013

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Identification of Widespread Adenosine Nucleotide Binding in Mycobacterium tuberculosis

Chemistry & biology, 2013-01, Vol.20 (1), p.123-133

2013

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Applying a Targeted Label-Free Approach Using LC−MS AMT Tags to Evaluate Changes in Protein Phosphorylation Following Phosphatase Inhibition

Journal of proteome research, 2007-11, Vol.6 (11), p.4489-4497

2007

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Quantitative phosphoproteome analysis of lysophosphatidic acid induced chemotaxis applying dual-step (18)O labeling coupled with immobilized metal-ion affinity chromatography

Journal of proteome research, 2008-10, Vol.7 (10), p.4215-4224

2008

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Intrinsic structural disorder and sequence features of the cell cycle inhibitor p57Kip2

Proteins, structure, function, and bioinformatics, 2002-01, Vol.46 (1), p.1-7

2002

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Stoichiometry of Cyclin A−Cyclin-Dependent Kinase 2 Inhibition by p21Cip1/Waf1

Biochemistry (Easton), 2000-11, Vol.39 (45), p.13925-13930

2000

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The genome organization of Thermotoga maritima reflects its lifestyle

VIPER: an advanced software package to support high-throughput LC-MS peptide identification

Structural and functional characterization of DUF1471 domains of Salmonella proteins SrfN, YdgH/SssB, and YahO

Comparative omics-driven genome annotation refinement: application across Yersiniae

ChIP-Seq Analysis of the σE Regulon of Salmonella enterica Serovar Typhimurium Reveals New Genes Implicated in Heat Shock and Oxidative Stress Response

Phosphoproteome Profiling of Human Skin Fibroblast Cells in Response to Low- and High-Dose Irradiation

Differential Label-free Quantitative Proteomic Analysis of Shewanella oneidensis Cultured under Aerobic and Suboxic Conditions by Accurate Mass and Time Tag Approach

Whole proteome analysis of post-translational modifications: applications of mass-spectrometry for proteogenomic annotation

Dynamic and Differential in Vivo Modifications of the Isoform HMGA1a and HMGA1b Chromatin Proteins

Identification of Cross-Linked Peptides after Click-Based Enrichment Using Sequential Collision-Induced Dissociation and Electron Transfer Dissociation Tandem Mass Spectrometry

Xlink-Identifier: An Automated Data Analysis Platform for Confident Identifications of Chemically Cross-Linked Peptides Using Tandem Mass Spectrometry

Crystal Structures of the F and pSLT Plasmid TraJ N‑Terminal Regions Reveal Similar Homodimeric PAS Folds with Functional Interchangeability

Mixed-Isotope Labeling with LC-IMS-MS for Characterization of Protein–Protein Interactions by Chemical Cross-Linking

A multi-pronged search for a common structural motif in the secretion signal of Salmonella enterica serovar Typhimurium type III effector proteins

Proteome-Wide Identification of Proteins and Their Modifications with Decreased Ambiguities and Improved False Discovery Rates Using Unique Sequence Tags

Characterization of macaque pulmonary fluid proteome during monkeypox infection: dynamics of host response

A Method for Investigating Protein−Protein Interactions Related to Salmonella Typhimurium Pathogenesis

New sub-family of lysozyme-like proteins shows no catalytic activity: crystallographic and biochemical study of STM3605 protein from Salmonella Typhimurium

Identification of Widespread Adenosine Nucleotide Binding in Mycobacterium tuberculosis

Applying a Targeted Label-Free Approach Using LC−MS AMT Tags to Evaluate Changes in Protein Phosphorylation Following Phosphatase Inhibition

Quantitative phosphoproteome analysis of lysophosphatidic acid induced chemotaxis applying dual-step (18)O labeling coupled with immobilized metal-ion affinity chromatography

Intrinsic structural disorder and sequence features of the cell cycle inhibitor p57Kip2

Stoichiometry of Cyclin A−Cyclin-Dependent Kinase 2 Inhibition by p21Cip1/Waf1

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