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The Mastery Rubric for Bioinformatics: A tool to support design and evaluation of career-spanning education and training

PloS one, 2019-11, Vol.14 (11), p.e0225256

2019

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Nubbin isoform antagonism governs Drosophila intestinal immune homeostasis

PLoS pathogens, 2018-03, Vol.14 (3), p.e1006936-e1006936

2018

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Altered DNA methylation of glycolytic and lipogenic genes in liver from obese and type 2 diabetic patients

Molecular metabolism (Germany), 2016-03, Vol.5 (3), p.171-183

2016

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Bruton's tyrosine kinase: cell biology, sequence conservation, mutation spectrum, siRNA modifications, and expression profiling

Immunological reviews, 2005-02, Vol.203 (1), p.200-215

2005

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In Situ Staining and Laser Capture Microdissection of Lymph Node Residing SIV Gag-Specific CD8+ T cells--A Tool to Interrogate a Functional Immune Response Ex Vivo

PloS one, 2016, Vol.11 (3), p.e0149907-e0149907

2016

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Hypoxia inducible factor‐2α importance for migration, proliferation, and self‐renewal of trunk neural crest cells

Developmental dynamics, 2021-02, Vol.250 (2), p.191-236

2021

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Custom design and analysis of high-density oligonucleotide bacterial tiling microarrays

PloS one, 2009-06, Vol.4 (6), p.e5943-e5943

2009

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Induction of Apoptosis in Intestinal Toxicity to a Histone Deacetylase Inhibitor in a Phase I Study with Pelvic Radiotherapy

Cancer Research and Treatment, 2017, 49(2), , pp.374-386

2017

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Genome-wide expression analysis of cells expressing gain of function mutant D374Y-PCSK9

Journal of cellular physiology, 2008-11, Vol.217 (2), p.459-467

2008

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Peroxisome Proliferator-activated Receptor γ Coactivator-1 α Isoforms Selectively Regulate Multiple Splicing Events on Target Genes

The Journal of biological chemistry, 2016-07, Vol.291 (29), p.15169-15184

2016

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Tiling array study of MNNG treated Escherichia coli reveals a widespread transcriptional response

Scientific reports, 2013-10, Vol.3 (1), p.3053, Article 3053

2013

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Epigenetic alterations in skin homing CD4 + CLA + T cells of atopic dermatitis patients

Scientific reports, 2020-10, Vol.10 (1), p.18020-18020, Article 18020

2020

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Transformation of mature mouse B cells into malignant plasma cells in vitro via introduction of defined genetic elements

European journal of immunology, 2019-03, Vol.49 (3), p.454-461

2019

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Loss of Caenorhabditis elegans UNG-1 uracil-DNA glycosylase affects apoptosis in response to DNA damaging agents

DNA repair, 2010-08, Vol.9 (8), p.861-870

2010

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Transcriptional signatures of Itk-deficient CD3+, CD4+ and CD8+ T-cells

BMC genomics, 2009-05, Vol.10 (1), p.233-233

2009

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A framework to assess the quality and impact of bioinformatics training across ELIXIR

PLoS computational biology, 2020-07, Vol.16 (7), p.e1007976-e1007976

2020

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The Oct1 homolog Nubbin is a repressor of NF-κB-dependent immune gene expression that increases the tolerance to gut microbiota

BMC biology, 2013-09, Vol.11 (1), p.99-99, Article 99

2013

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Gene expression profile of B cells from Xid mice and Btk knockout mice

European Journal of Immunology, 2004-07, Vol.34 (7), p.1981-1991

2004

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Distinct gene expression signature in Btk-defective T1 B-cells

Biochemical and biophysical research communications, 2006-07, Vol.346 (2), p.461-469

2006

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A microarray whole-genome gene expression dataset in a rat model of inflammatory corneal angiogenesis

Scientific data, 2016-11, Vol.3 (1), p.160103-160103, Article 160103

2016

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Defective Toll-like receptor 9-mediated cytokine production in B cells from Bruton's tyrosine kinase-deficient mice

Immunology, 2008-02, Vol.123 (2), p.239-249

2008

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Expression profiling of chicken DT40 lymphoma cells indicates clonal selection of knockout and gene reconstituted cells

Biochemical and biophysical research communications, 2008-12, Vol.377 (2), p.584-588

2008

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Differential expression and molecular characterisation of Lmo7, Myo1e, Sash1, and Mcoln2 genes in Btk-defective B-cells

Cellular Immunology, 2005-05, Vol.235 (1), p.46-55

2005

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In silico tools for signal transduction research

Briefings in bioinformatics, 2003-12, Vol.4 (4), p.315-324

2003

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The Mastery Rubric for Bioinformatics: A tool to support design and evaluation of career-spanning education and training

Nubbin isoform antagonism governs Drosophila intestinal immune homeostasis

Altered DNA methylation of glycolytic and lipogenic genes in liver from obese and type 2 diabetic patients

Bruton's tyrosine kinase: cell biology, sequence conservation, mutation spectrum, siRNA modifications, and expression profiling

In Situ Staining and Laser Capture Microdissection of Lymph Node Residing SIV Gag-Specific CD8+ T cells--A Tool to Interrogate a Functional Immune Response Ex Vivo

Hypoxia inducible factor‐2α importance for migration, proliferation, and self‐renewal of trunk neural crest cells

Custom design and analysis of high-density oligonucleotide bacterial tiling microarrays

Induction of Apoptosis in Intestinal Toxicity to a Histone Deacetylase Inhibitor in a Phase I Study with Pelvic Radiotherapy

Genome-wide expression analysis of cells expressing gain of function mutant D374Y-PCSK9

Peroxisome Proliferator-activated Receptor γ Coactivator-1 α Isoforms Selectively Regulate Multiple Splicing Events on Target Genes

Tiling array study of MNNG treated Escherichia coli reveals a widespread transcriptional response

Epigenetic alterations in skin homing CD4 + CLA + T cells of atopic dermatitis patients

Transformation of mature mouse B cells into malignant plasma cells in vitro via introduction of defined genetic elements

Loss of Caenorhabditis elegans UNG-1 uracil-DNA glycosylase affects apoptosis in response to DNA damaging agents

Transcriptional signatures of Itk-deficient CD3+, CD4+ and CD8+ T-cells

A framework to assess the quality and impact of bioinformatics training across ELIXIR

An international consensus on effective, inclusive, and career-spanning short-format training in the life sciences and beyond

The Oct1 homolog Nubbin is a repressor of NF-κB-dependent immune gene expression that increases the tolerance to gut microbiota

Gene expression profile of B cells from Xid mice and Btk knockout mice

Distinct gene expression signature in Btk-defective T1 B-cells

A microarray whole-genome gene expression dataset in a rat model of inflammatory corneal angiogenesis

Defective Toll-like receptor 9-mediated cytokine production in B cells from Bruton's tyrosine kinase-deficient mice

Expression profiling of chicken DT40 lymphoma cells indicates clonal selection of knockout and gene reconstituted cells

Differential expression and molecular characterisation of Lmo7, Myo1e, Sash1, and Mcoln2 genes in Btk-defective B-cells

In silico tools for signal transduction research

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