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Microbiome interactions shape host fitness

Proceedings of the National Academy of Sciences - PNAS, 2018-12, Vol.115 (51), p.E11951-E11960

2018

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First-passage-time statistics of growing microbial populations carry an imprint of initial conditions

Scientific reports, 2023-12, Vol.13 (1), p.21340-21340, Article 21340

2023

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The importance of host physical niches for the stability of gut microbiome composition

Philosophical transactions of the Royal Society of London. Series B. Biological sciences, 2024-05, Vol.379 (1901), p.20230066

Ludington, William B

2024

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Higher-order microbiome interactions and how to find them

Trends in microbiology (Regular ed.), 2022-07, Vol.30 (7), p.618-621

Ludington, William B.

2022

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A symbiotic physical niche in Drosophila melanogaster regulates stable association of a multi-species gut microbiota

Nature communications, 2023-03, Vol.14 (1), p.1557-1557, Article 1557

2023

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Bacterial interspecies interactions modulate pH-mediated antibiotic tolerance

eLife, 2020-01, Vol.9

2020

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Avalanche-like behavior in ciliary import

Proceedings of the National Academy of Sciences - PNAS, 2013-03, Vol.110 (10), p.3925-3930

2013

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A chemically-defined growth medium to support Lactobacillus-Acetobacter sp. community analysis

PloS one, 2023-10, Vol.18 (10), p.e0292585-e0292585

2023

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Bellymount enables longitudinal, intravital imaging of abdominal organs and the gut microbiota in adult Drosophila

PLoS biology, 2020-01, Vol.18 (1), p.e3000567-e3000567

2020

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Stable Host Gene Expression in the Gut of Adult Drosophila melanogaster with Different Bacterial Mono-Associations

PloS one, 2016-11, Vol.11 (11), p.e0167357

2016

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Assessing biosynthetic potential of agricultural groundwater through metagenomic sequencing: A diverse anammox community dominates nitrate-rich groundwater

PloS one, 2017-04, Vol.12 (4), p.e0174930

2017

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A Systematic Comparison of Mathematical Models for Inherent Measurement of Ciliary Length: How a Cell Can Measure Length and Volume

Biophysical journal, 2015-03, Vol.108 (6), p.1361-1379

2015

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Microbial Quantity Impacts Drosophila Nutrition, Development, and Lifespan

iScience, 2018-06, Vol.4, p.247-259

2018

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Cellular and molecular organization of the Drosophila foregut

Proceedings of the National Academy of Sciences - PNAS, 2024-03, Vol.121 (11), p.e2318760121

2024

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Master regulators of biological systems in higher dimensions

Proceedings of the National Academy of Sciences - PNAS, 2023-12, Vol.120 (51), p.e2300634120-e2300634120

2023

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Stochastic microbiome assembly depends on context

Proceedings of the National Academy of Sciences - PNAS, 2022-02, Vol.119 (7)

2022

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Isolation and characterization of a protochordate histocompatibility locus

Nature, 2005-11, Vol.438 (7067), p.454-459

2005

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Whole Animal Feeding FLat (WAFFL): a complete and comprehensive validation of a novel, high-throughput fly experimentation system

G3 : genes - genomes - genetics, 2023-03, Vol.13 (3)

2023

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Pulsed, continuous or somewhere in between? Resource dynamics matter in the optimisation of microbial communities

The ISME Journal, 2023-04, Vol.17 (4), p.641-644

2023

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Nutrient encryption and the diversity of cobamides, siderophores, and glycans

Trends in microbiology (Regular ed.), 2023-02, Vol.31 (2), p.115-119

2023

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Fast Colony Forming Unit Counting in 96-Well Plate Format Applied to the Drosophila Microbiome

Journal of visualized experiments, 2023-01 (191)

2023

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From a parts list to assembly instructions and an operating manual: how small host models can re-write microbiome theory

Current opinion in microbiology, 2021-12, Vol.64, p.146-151

2021

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Diet influences host–microbiota associations in Drosophila

Proceedings of the National Academy of Sciences - PNAS, 2018-05, Vol.115 (20), p.E4547-E4548

2018

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fester, a Candidate Allorecognition Receptor from a Primitive Chordate

Immunity (Cambridge, Mass.), 2006-07, Vol.25 (1), p.163-173

2006

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Cluster partitions and fitness landscapes of the Drosophila fly microbiome

Journal of mathematical biology, 2019-08, Vol.79 (3), p.861-899

2019

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Microbiome interactions shape host fitness

First-passage-time statistics of growing microbial populations carry an imprint of initial conditions

The importance of host physical niches for the stability of gut microbiome composition

Higher-order microbiome interactions and how to find them

A symbiotic physical niche in Drosophila melanogaster regulates stable association of a multi-species gut microbiota

Bacterial interspecies interactions modulate pH-mediated antibiotic tolerance

Avalanche-like behavior in ciliary import

A chemically-defined growth medium to support Lactobacillus-Acetobacter sp. community analysis

Bellymount enables longitudinal, intravital imaging of abdominal organs and the gut microbiota in adult Drosophila

Stable Host Gene Expression in the Gut of Adult Drosophila melanogaster with Different Bacterial Mono-Associations

Assessing biosynthetic potential of agricultural groundwater through metagenomic sequencing: A diverse anammox community dominates nitrate-rich groundwater

A Systematic Comparison of Mathematical Models for Inherent Measurement of Ciliary Length: How a Cell Can Measure Length and Volume

Microbial Quantity Impacts Drosophila Nutrition, Development, and Lifespan

Cellular and molecular organization of the Drosophila foregut

Master regulators of biological systems in higher dimensions

Stochastic microbiome assembly depends on context

Isolation and characterization of a protochordate histocompatibility locus

Whole Animal Feeding FLat (WAFFL): a complete and comprehensive validation of a novel, high-throughput fly experimentation system

Pulsed, continuous or somewhere in between? Resource dynamics matter in the optimisation of microbial communities

Nutrient encryption and the diversity of cobamides, siderophores, and glycans

Fast Colony Forming Unit Counting in 96-Well Plate Format Applied to the Drosophila Microbiome

From a parts list to assembly instructions and an operating manual: how small host models can re-write microbiome theory

Diet influences host–microbiota associations in Drosophila

fester, a Candidate Allorecognition Receptor from a Primitive Chordate

Cluster partitions and fitness landscapes of the Drosophila fly microbiome

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