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CATH: an expanded resource to predict protein function through structure and sequence

Nucleic acids research, 2017-01, Vol.45 (D1), p.D289

2017

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VarSite: Disease variants and protein structure

Protein science, 2020-01, Vol.29 (1), p.111-119

2020

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Residue mutations and their impact on protein structure and function: detecting beneficial and pathogenic changes

Biochemical journal, 2013-02, Vol.449 (3), p.581-594

2013

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Protein function prediction using domain families

BMC bioinformatics, 2013-02, Vol.14 Suppl 3 (Suppl 3), p.S5-S5, Article S5

2013

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Computational approaches to predict protein functional families and functional sites

Current opinion in structural biology, 2021-10, Vol.70, p.108-122

2021

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Stability-activity tradeoffs constrain the adaptive evolution of RubisCO

Proceedings of the National Academy of Sciences - PNAS, 2014-02, Vol.111 (6), p.2223-2228

2014

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Biological impact of mutually exclusive exon switching

PLoS computational biology, 2021-03, Vol.17 (3), p.e1008708-e1008708

2021

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New functional families (FunFams) in CATH to improve the mapping of conserved functional sites to 3D structures

Nucleic acids research, 2013-01, Vol.41 (Database issue), p.D490

2013

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Protein function prediction – the power of multiplicity

Trends in biotechnology (Regular ed.), 2009-04, Vol.27 (4), p.210-219

2009

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Predicting human and viral protein variants affecting COVID-19 susceptibility and repurposing therapeutics

Scientific reports, 2024-06, Vol.14 (1), p.14208-19, Article 14208

2024

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Gene3D: expanding the utility of domain assignments

Nucleic acids research, 2016-01, Vol.44 (D1), p.D404

2016

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Low-Density Lipoprotein Receptor Gene Familial Hypercholesterolemia Variant Database: Update and Pathological Assessment

Annals of human genetics, 2012-09, Vol.76 (5), p.387-401

2012

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Exploring the structure and function paradigm

Current opinion in structural biology, 2008-06, Vol.18 (3), p.394-402

2008

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Analysis of temporal transcription expression profiles reveal links between protein function and developmental stages of Drosophila melanogaster

PLoS computational biology, 2017-10, Vol.13 (10), p.e1005791-e1005791

2017

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An Ancient Fingerprint Indicates the Common Ancestry of Rossmann-Fold Enzymes Utilizing Different Ribose-Based Cofactors

PLoS biology, 2016-03, Vol.14 (3), p.e1002396-e1002396

2016

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ISCB's initial reaction to New England Journal of Medicine editorial on data sharing

Bioinformatics (Oxford, England), 2017-09, Vol.33 (18), p.2968-2968

2017

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Genome-wide RNA-Sequencing analysis identifies a distinct fibrosis gene signature in the conjunctiva after glaucoma surgery

Scientific reports, 2017-07, Vol.7 (1), p.5644-13, Article 5644

2017

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A Novel Group of Dynamin-Related Proteins Shared by Eukaryotes and Giant Viruses Is Able to Remodel Mitochondria From Within the Matrix

Molecular biology and evolution, 2023-06, Vol.40 (6)

2023

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Diversity and distribution of nuclease bacteriocins in bacterial genomes revealed using Hidden Markov Models

PLoS computational biology, 2017-07, Vol.13 (7), p.e1005652-e1005652

2017

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KinFams: De-Novo Classification of Protein Kinases Using CATH Functional Units

Biomolecules (Basel, Switzerland), 2023-02, Vol.13 (2), p.277

2023

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implications of alternative splicing in the ENCODE protein complement

Proceedings of the National Academy of Sciences - PNAS, 2007-03, Vol.104 (13), p.5495-5500

2007

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Systematic Mapping of Protein Mutational Space by Prolonged Drift Reveals the Deleterious Effects of Seemingly Neutral Mutations

PLoS computational biology, 2015-08, Vol.11 (8), p.e1004421

2015

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Conformational diversity analysis reveals three functional mechanisms in proteins

PLoS computational biology, 2017-02, Vol.13 (2), p.e1005398-e1005398

2017

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Determining effects of non-synonymous SNPs on protein-protein interactions using supervised and semi-supervised learning

PLoS computational biology, 2014-05, Vol.10 (5), p.e1003592

2014

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Global patterns of protein domain gain and loss in superkingdoms

PLoS computational biology, 2014-01, Vol.10 (1), p.e1003452-e1003452

2014

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CATH: an expanded resource to predict protein function through structure and sequence

VarSite: Disease variants and protein structure

Residue mutations and their impact on protein structure and function: detecting beneficial and pathogenic changes

Protein function prediction using domain families

Computational approaches to predict protein functional families and functional sites

Stability-activity tradeoffs constrain the adaptive evolution of RubisCO

Biological impact of mutually exclusive exon switching

New functional families (FunFams) in CATH to improve the mapping of conserved functional sites to 3D structures

Protein function prediction – the power of multiplicity

Predicting human and viral protein variants affecting COVID-19 susceptibility and repurposing therapeutics

Gene3D: expanding the utility of domain assignments

Low-Density Lipoprotein Receptor Gene Familial Hypercholesterolemia Variant Database: Update and Pathological Assessment

Exploring the structure and function paradigm

Analysis of temporal transcription expression profiles reveal links between protein function and developmental stages of Drosophila melanogaster

An Ancient Fingerprint Indicates the Common Ancestry of Rossmann-Fold Enzymes Utilizing Different Ribose-Based Cofactors

ISCB's initial reaction to New England Journal of Medicine editorial on data sharing

Genome-wide RNA-Sequencing analysis identifies a distinct fibrosis gene signature in the conjunctiva after glaucoma surgery

A Novel Group of Dynamin-Related Proteins Shared by Eukaryotes and Giant Viruses Is Able to Remodel Mitochondria From Within the Matrix

Diversity and distribution of nuclease bacteriocins in bacterial genomes revealed using Hidden Markov Models

KinFams: De-Novo Classification of Protein Kinases Using CATH Functional Units

implications of alternative splicing in the ENCODE protein complement

Systematic Mapping of Protein Mutational Space by Prolonged Drift Reveals the Deleterious Effects of Seemingly Neutral Mutations

Conformational diversity analysis reveals three functional mechanisms in proteins

Determining effects of non-synonymous SNPs on protein-protein interactions using supervised and semi-supervised learning

Global patterns of protein domain gain and loss in superkingdoms

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