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Validation of an LC-MS/MS Method Using Solid-Phase Extraction for the Quantification of 1-84 Parathyroid Hormone: Toward a Candidate Reference Measurement Procedure

Clinical chemistry (Baltimore, Md.), 2022-11, Vol.68 (11), p.1399-1409

2022

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Online Parallel Accumulation–Serial Fragmentation (PASEF) with a Novel Trapped Ion Mobility Mass Spectrometer

Molecular & cellular proteomics, 2018-12, Vol.17 (12), p.2534-2545

2018

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Differential proteomic analysis of virus-enriched fractions obtained from plasma pools of patients with dengue fever or severe dengue

BMC infectious diseases, 2015-11, Vol.15 (516), p.518-518, Article 518

2015

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Proteome-wide profiling of protein assemblies by cross-linking mass spectrometry

Nature methods, 2015-12, Vol.12 (12), p.1179

2015

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MSFragger: ultrafast and comprehensive peptide identification in mass spectrometry-based proteomics

Nature methods, 2017-05, Vol.14 (5), p.513

2017

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Eight key rules for successful data‐dependent acquisition in mass spectrometry‐based metabolomics

Mass spectrometry reviews, 2023-01, Vol.42 (1), p.131-143

2023

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SIRIUS 4: a rapid tool for turning tandem mass spectra into metabolite structure information

Nature methods, 2019-04, Vol.16 (4), p.299

2019

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Selection of internal standards for accurate quantification of complex lipid species in biological extracts by electrospray ionization mass spectrometry—What, how and why?

Mass spectrometry reviews, 2017-11, Vol.36 (6), p.693-714

2017

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Prosit: proteome-wide prediction of peptide tandem mass spectra by deep learning

Nature methods, 2019-06, Vol.16 (6), p.509

2019

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MS-DIAL: data-independent MS/MS deconvolution for comprehensive metabolome analysis

Nature methods, 2015-06, Vol.12 (6), p.523

2015

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LipidBlast in silico tandem mass spectrometry database for lipid identification

Nature methods, 2013-08, Vol.10 (8), p.755

2013

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Topic modeling for untargeted substructure exploration in metabolomics

Proceedings of the National Academy of Sciences - PNAS, 2016-11, Vol.113 (48), p.13738-13743

2016

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Reproducible molecular networking of untargeted mass spectrometry data using GNPS

Nature protocols, 2020-06, Vol.15 (6), p.1954-1991

2020

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DMSO enhances electrospray response, boosting sensitivity of proteomic experiments

Nature methods, 2013-10, Vol.10 (10), p.989

2013

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Mass Spectrometry Profiling of HLA-Associated Peptidomes in Mono-allelic Cells Enables More Accurate Epitope Prediction

Immunity (Cambridge, Mass.), 2017-02, Vol.46 (2), p.315-326

2017

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Multiplexed single-cell proteomics using SCoPE2

Nature protocols, 2021-12, Vol.16 (12), p.5398-5425

2021

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Molecular Networking As a Drug Discovery, Drug Metabolism, and Precision Medicine Strategy

Trends in pharmacological sciences (Regular ed.), 2017-02, Vol.38 (2), p.143-154

2017

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Global metabolic profiling of animal and human tissues via UPLC-MS

Nature protocols, 2013-01, Vol.8 (1), p.17-32

2013

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Defining the carrier proteome limit for single-cell proteomics

Nature methods, 2021-01, Vol.18 (1), p.76

2021

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Universal sample preparation method for proteome analysis

Nature methods, 2009-05, Vol.6 (5), p.359-362

2009

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Robust, reproducible and quantitative analysis of thousands of proteomes by micro-flow LC-MS/MS

Nature communications, 2020-01, Vol.11 (1), p.157-157, Article 157

2020

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Metabolic reaction network-based recursive metabolite annotation for untargeted metabolomics

Nature communications, 2019-04, Vol.10 (1), p.1516-1516, Article 1516

2019

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Chromatogram libraries improve peptide detection and quantification by data independent acquisition mass spectrometry

Nature communications, 2018-12, Vol.9 (1), p.5128-12, Article 5128

2018

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Generating high quality libraries for DIA MS with empirically corrected peptide predictions

Nature communications, 2020-03, Vol.11 (1), p.1548-1548, Article 1548

2020

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Higher-energy C-trap dissociation for peptide modification analysis

Nature methods, 2007-09, Vol.4 (9), p.709-712

2007

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Validation of an LC-MS/MS Method Using Solid-Phase Extraction for the Quantification of 1-84 Parathyroid Hormone: Toward a Candidate Reference Measurement Procedure

Online Parallel Accumulation–Serial Fragmentation (PASEF) with a Novel Trapped Ion Mobility Mass Spectrometer

Differential proteomic analysis of virus-enriched fractions obtained from plasma pools of patients with dengue fever or severe dengue

Proteome-wide profiling of protein assemblies by cross-linking mass spectrometry

MSFragger: ultrafast and comprehensive peptide identification in mass spectrometry-based proteomics

Eight key rules for successful data‐dependent acquisition in mass spectrometry‐based metabolomics

SIRIUS 4: a rapid tool for turning tandem mass spectra into metabolite structure information

Selection of internal standards for accurate quantification of complex lipid species in biological extracts by electrospray ionization mass spectrometry—What, how and why?

Prosit: proteome-wide prediction of peptide tandem mass spectra by deep learning

MS-DIAL: data-independent MS/MS deconvolution for comprehensive metabolome analysis

LipidBlast in silico tandem mass spectrometry database for lipid identification

Topic modeling for untargeted substructure exploration in metabolomics

Reproducible molecular networking of untargeted mass spectrometry data using GNPS

DMSO enhances electrospray response, boosting sensitivity of proteomic experiments

Mass Spectrometry Profiling of HLA-Associated Peptidomes in Mono-allelic Cells Enables More Accurate Epitope Prediction

Multiplexed single-cell proteomics using SCoPE2

Molecular Networking As a Drug Discovery, Drug Metabolism, and Precision Medicine Strategy

Global metabolic profiling of animal and human tissues via UPLC-MS

Defining the carrier proteome limit for single-cell proteomics

Universal sample preparation method for proteome analysis

Robust, reproducible and quantitative analysis of thousands of proteomes by micro-flow LC-MS/MS

Metabolic reaction network-based recursive metabolite annotation for untargeted metabolomics

Chromatogram libraries improve peptide detection and quantification by data independent acquisition mass spectrometry

Generating high quality libraries for DIA MS with empirically corrected peptide predictions

Higher-energy C-trap dissociation for peptide modification analysis

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