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TESS3: fast inference of spatial population structure and genome scans for selection

Molecular ecology resources, 2016-03, Vol.16 (2), p.540-548

2016

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Cost-effective enrichment hybridization capture of chloroplast genomes at deep multiplexing levels for population genetics and phylogeography studies

Molecular ecology resources, 2014-11, Vol.14 (6), p.1103-1113

2014

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Evaluating hypotheses of expansion from refugia through comparative phylogeography of south-eastern Coastal Plain amphibians

Journal of biogeography, 2017-12, Vol.44 (12), p.2692-2705

2017

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Integrating statistical genetic and geospatial methods brings new power to phylogeography

Molecular phylogenetics and evolution, 2011-05, Vol.59 (2), p.523-537

2011

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The Utility of Single Nucleotide Polymorphism (SNP) Data in Phylogenetics

Annual review of ecology, evolution, and systematics, 2017-11, Vol.48 (1), p.69-84

2017

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The Promises and Pitfalls of Next-Generation Sequencing Data in Phylogeography

Systematic biology, 2012-10, Vol.61 (5), p.713-715

2012

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Unifying viral genetics and human transportation data to predict the global transmission dynamics of human influenza H3N2

PLoS pathogens, 2014-02, Vol.10 (2), p.e1003932-e1003932

2014

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Birth of a biome: insights into the assembly and maintenance of the Australian arid zone biota

Molecular ecology, 2008-10, Vol.17 (20), p.4398-4417

2008

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Reconstructing routes of invasion using genetic data: why, how and so what

Molecular ecology, 2010-10, Vol.19 (19), p.4113-4130

2010

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StrAuto: automation and parallelization of STRUCTURE analysis

BMC bioinformatics, 2017-03, Vol.18 (1), p.192-192, Article 192

2017

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A global analysis of bats using automated comparative phylogeography uncovers a surprising impact of Pleistocene glaciation

Journal of biogeography, 2018-08, Vol.45 (8), p.1795-1805

2018

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Identifying hybridization and admixture using SNPs: application of the DArTseq platform in phylogeographic research on vertebrates

Royal Society open science, 2017-07, Vol.4 (7), p.161061-161061

2017

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From metabarcoding to metaphylogeography: separating the wheat from the chaff

Ecological applications, 2020-03, Vol.30 (2), p.1-19

2020

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Contrasting phylogeography of two Western Palaearctic fish parasites despite similar life cycles

Journal of biogeography, 2018-01, Vol.45 (1), p.101-115

2018

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A synthesis of genetic connectivity in deep-sea fauna and implications for marine reserve design

Molecular ecology, 2016-07, Vol.25 (14), p.3276-3298

2016

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Genetic evidence further elucidates the history and extent of badger introductions from Great Britain into Ireland

Royal Society open science, 2020-04, Vol.7 (4), p.200288-200288

2020

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Predicting Thermal Adaptation by Looking Into Populations' Genomic Past

Frontiers in genetics, 2020-09, Vol.11, p.564515

2020

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Evolutionary History of the Asian Horned Frogs (Megophryinae): Integrative Approaches to Timetree Dating in the Absence of a Fossil Record

Molecular biology and evolution, 2017-03, Vol.34 (3), p.744-771

2017

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Phylogeography of a Holarctic rodent (Myodes rutilus): testing high-latitude biogeographical hypotheses and the dynamics of range shifts

Journal of biogeography, 2015-02, Vol.42 (2), p.377-389

2015

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mapmixture: An R package and web app for spatial visualisation of admixture and population structure

Molecular ecology resources, 2024-05, Vol.24 (4), p.e13943-n/a

Jenkins, Tom L.

2024

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The Current Genomic Landscape of Western South America: Andes, Amazonia, and Pacific Coast

Molecular biology and evolution, 2019-12, Vol.36 (12), p.2698-2713

2019

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A phylogeographical survey of a highly dispersive spider reveals eastern Asia as a major glacial refugium for Palaearctic fauna

Journal of biogeography, 2016-08, Vol.43 (8), p.1583-1594

2016

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Using phylogeography to define conservation priorities: The case of narrow endemic plants in the Mediterranean Basin hotspot

Biological conservation, 2018-08, Vol.224, p.258-266

2018

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Phylogeography of Brazilian pine (Araucaria angustifolia): integrative evidence for pre-Columbian anthropogenic dispersal

Tree genetics & genomes, 2018-06, Vol.14 (3), p.1-12, Article 36

2018

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TESS3: fast inference of spatial population structure and genome scans for selection

Cost-effective enrichment hybridization capture of chloroplast genomes at deep multiplexing levels for population genetics and phylogeography studies

Evaluating hypotheses of expansion from refugia through comparative phylogeography of south-eastern Coastal Plain amphibians

Integrating statistical genetic and geospatial methods brings new power to phylogeography

The Utility of Single Nucleotide Polymorphism (SNP) Data in Phylogenetics

The Promises and Pitfalls of Next-Generation Sequencing Data in Phylogeography

Unifying viral genetics and human transportation data to predict the global transmission dynamics of human influenza H3N2

Birth of a biome: insights into the assembly and maintenance of the Australian arid zone biota

Reconstructing routes of invasion using genetic data: why, how and so what

StrAuto: automation and parallelization of STRUCTURE analysis

A global analysis of bats using automated comparative phylogeography uncovers a surprising impact of Pleistocene glaciation

The genomic ancestry of individuals from different geographical regions of Brazil is more uniform than expected

Identifying hybridization and admixture using SNPs: application of the DArTseq platform in phylogeographic research on vertebrates

From metabarcoding to metaphylogeography: separating the wheat from the chaff

Contrasting phylogeography of two Western Palaearctic fish parasites despite similar life cycles

A synthesis of genetic connectivity in deep-sea fauna and implications for marine reserve design

Genetic evidence further elucidates the history and extent of badger introductions from Great Britain into Ireland

Predicting Thermal Adaptation by Looking Into Populations' Genomic Past

Evolutionary History of the Asian Horned Frogs (Megophryinae): Integrative Approaches to Timetree Dating in the Absence of a Fossil Record

Phylogeography of a Holarctic rodent (Myodes rutilus): testing high-latitude biogeographical hypotheses and the dynamics of range shifts

mapmixture: An R package and web app for spatial visualisation of admixture and population structure

The Current Genomic Landscape of Western South America: Andes, Amazonia, and Pacific Coast

A phylogeographical survey of a highly dispersive spider reveals eastern Asia as a major glacial refugium for Palaearctic fauna

Using phylogeography to define conservation priorities: The case of narrow endemic plants in the Mediterranean Basin hotspot

Phylogeography of Brazilian pine (Araucaria angustifolia): integrative evidence for pre-Columbian anthropogenic dispersal

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