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Precise phylogenetic analysis of microbial isolates and genomes from metagenomes using PhyloPhlAn 3.0

Nature communications, 2020-05, Vol.11 (1), p.2500-2500, Article 2500

2020

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Specific gut microbiome signatures and the associated pro-inflamatory functions are linked to pediatric allergy and acquisition of immune tolerance

Nature communications, 2021-10, Vol.12 (1), p.5958-5958, Article 5958

2021

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Stool microRNA profiles reflect different dietary and gut microbiome patterns in healthy individuals

Gut, 2022-07, Vol.71 (7), p.1302-1314

2022

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Refining dual RNA-seq mapping: sequential and combined approaches in host-parasitic plant dynamics

Frontiers in plant science, 2024-11, Vol.15

2024

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Unexplored diversity and strain-level structure of the skin microbiome associated with psoriasis

NPJ biofilms and microbiomes, 2017-06, Vol.3 (1), p.14-12, Article 14

2017

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Strong oral plaque microbiome signatures for dental implant diseases identified by strain-resolution metagenomics

NPJ biofilms and microbiomes, 2020-10, Vol.6 (1), p.47-47, Article 47

2020

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Large-Scale Phylogenomics of the Lactobacillus casei Group Highlights Taxonomic Inconsistencies and Reveals Novel Clade-Associated Features

mSystems, 2017-07, Vol.2 (4)

2017

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Plastics shape the black soldier fly larvae gut microbiome and select for biodegrading functions

Microbiome, 2023-09, Vol.11 (1), p.1-18, Article 205

2023

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Favorable subgingival plaque microbiome shifts are associated with clinical treatment for peri-implant diseases

NPJ biofilms and microbiomes, 2024-02, Vol.10 (1), p.12-12, Article 12

2024

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Advanced Deep Learning Strategies for the Analysis of Remote Sensing Images

2021

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Draft Genome Sequence of the Planktic Cyanobacterium Tychonema bourrellyi, Isolated from Alpine Lentic Freshwater

Genome announcements (Washington, DC), 2017-11, Vol.5 (47)

2017

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Draft Genome Sequences of Novel Pseudomonas , Flavobacterium , and Sediminibacterium Species Strains from a Freshwater Ecosystem

Genome announcements (Washington, DC), 2018-02, Vol.6 (5)

2018

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Correction for Pinto et al., “Draft Genome Sequences of Novel Pseudomonas, Flavobacterium, and Sediminibacterium Strains from a Freshwater Ecosystem”

Genome announcements (Washington, DC), 2018-03, Vol.6 (10)

2018

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Assessment of Pollution in the Central Soils of Khuzestan Province with Potentially Toxic Elements (PTEs) and their Origins

Majallah-i āb va khāk, 2023-08, Vol.37 (3), p.457-471

2023

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Erratum: MetaPhlAn2 for enhanced metagenomic taxonomic profiling

Nature methods, 2016, Vol.13 (1), p.101-101

2016

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Establishment of a non-Westernized gut microbiota in men who have sex with men is associated with sexual practices

Cell reports. Medicine, 2024-03, Vol.5 (3), p.101426-101426, Article 101426

2024

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Large-Scale Phylogenomics of the italic toggle="yes">Lactobacillus casei /italic> Group Highlights Taxonomic Inconsistencies and Reveals Novel Clade-Associated Features

mSystems, 2017-08, Vol.2 (4)

2017

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Cancer Induces a Stress Ileopathy Depending on β-Adrenergic Receptors and Promoting Dysbiosis that Contributes to Carcinogenesis

Cancer discovery, 2022-04, Vol.12 (4), p.1128-1151

2022

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Crop Mapping through an Adaptive Multiview Active Learning Strategy

2019 IEEE International Workshop on Metrology for Agriculture and Forestry (MetroAgriFor), 2019, p.307-311

2019

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Advances in Hyperspectral Image Classification Methods for Vegetation and Agricultural Cropland Studies

iHyperspectral Indices and Image Classifications for Agriculture and Vegetation, 2019, Vol.II, p.67-104

2, 2019

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Combining active and metric learning for hyperspectral image classification

2014 6th Workshop on Hyperspectral Image and Signal Processing: Evolution in Remote Sensing (WHISPERS), 2014, p.1-4

2014

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SVR active learning for product quality control

2012 11th International Conference on Information Science, Signal Processing and their Applications (ISSPA), 2012, p.1113-1117

2012

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Satellite Image Time Series: Mathematical Models for Data Mining and Missing Data Restoration

Mathematical Models for Remote Sensing Image Processing, 2017, p.357-398

2017

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Dataset shift adaptation with active queries

2011 Joint Urban Remote Sensing Event, 2011, p.121-124

2011

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Precise phylogenetic analysis of microbial isolates and genomes from metagenomes using PhyloPhlAn 3.0

Specific gut microbiome signatures and the associated pro-inflamatory functions are linked to pediatric allergy and acquisition of immune tolerance

Stool microRNA profiles reflect different dietary and gut microbiome patterns in healthy individuals

Refining dual RNA-seq mapping: sequential and combined approaches in host-parasitic plant dynamics

Unexplored diversity and strain-level structure of the skin microbiome associated with psoriasis

Strong oral plaque microbiome signatures for dental implant diseases identified by strain-resolution metagenomics

Large-Scale Phylogenomics of the Lactobacillus casei Group Highlights Taxonomic Inconsistencies and Reveals Novel Clade-Associated Features

Plastics shape the black soldier fly larvae gut microbiome and select for biodegrading functions

Favorable subgingival plaque microbiome shifts are associated with clinical treatment for peri-implant diseases

Advanced Deep Learning Strategies for the Analysis of Remote Sensing Images

Draft Genome Sequence of the Planktic Cyanobacterium Tychonema bourrellyi, Isolated from Alpine Lentic Freshwater

Draft Genome Sequences of Novel Pseudomonas , Flavobacterium , and Sediminibacterium Species Strains from a Freshwater Ecosystem

Correction for Pinto et al., “Draft Genome Sequences of Novel Pseudomonas, Flavobacterium, and Sediminibacterium Strains from a Freshwater Ecosystem”

Assessment of Pollution in the Central Soils of Khuzestan Province with Potentially Toxic Elements (PTEs) and their Origins

Erratum: MetaPhlAn2 for enhanced metagenomic taxonomic profiling

Establishment of a non-Westernized gut microbiota in men who have sex with men is associated with sexual practices

The future of food and nutrition in ELIXIR [version 1; peer review: 2 approved with reservations]

Large-Scale Phylogenomics of the italic toggle="yes">Lactobacillus casei /italic> Group Highlights Taxonomic Inconsistencies and Reveals Novel Clade-Associated Features

Cancer Induces a Stress Ileopathy Depending on β-Adrenergic Receptors and Promoting Dysbiosis that Contributes to Carcinogenesis

Crop Mapping through an Adaptive Multiview Active Learning Strategy

Advances in Hyperspectral Image Classification Methods for Vegetation and Agricultural Cropland Studies

Combining active and metric learning for hyperspectral image classification

SVR active learning for product quality control

Satellite Image Time Series: Mathematical Models for Data Mining and Missing Data Restoration

Dataset shift adaptation with active queries

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