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InterPro in 2022

Nucleic acids research, 2023-01, Vol.51 (D1), p.D418

2023

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CATH: an expanded resource to predict protein function through structure and sequence

Nucleic acids research, 2017-01, Vol.45 (D1), p.D289

2017

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CATH: increased structural coverage of functional space

Nucleic acids research, 2021-01, Vol.49 (D1), p.D266

2021

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VarSite: Disease variants and protein structure

Protein science, 2020-01, Vol.29 (1), p.111-119

2020

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Residue mutations and their impact on protein structure and function: detecting beneficial and pathogenic changes

Biochemical journal, 2013-02, Vol.449 (3), p.581-594

2013

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Protein function prediction using domain families

BMC bioinformatics, 2013-02, Vol.14 Suppl 3 (Suppl 3), p.S5-S5, Article S5

2013

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Stability-activity tradeoffs constrain the adaptive evolution of RubisCO

Proceedings of the National Academy of Sciences - PNAS, 2014-02, Vol.111 (6), p.2223-2228

2014

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CATH: expanding the horizons of structure-based functional annotations for genome sequences

Nucleic acids research, 2019-01, Vol.47 (D1), p.D280

2019

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Functional classification of CATH superfamilies: a domain-based approach for protein function annotation

Bioinformatics, 2015-11, Vol.31 (21), p.3460-3467

2015

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Biological impact of mutually exclusive exon switching

PLoS computational biology, 2021-03, Vol.17 (3), p.e1008708-e1008708

2021

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Generating functional protein variants with variational autoencoders

PLoS computational biology, 2021-02, Vol.17 (2), p.e1008736-e1008736

2021

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New functional families (FunFams) in CATH to improve the mapping of conserved functional sites to 3D structures

Nucleic acids research, 2013-01, Vol.41 (Database issue), p.D490

2013

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Predicting human and viral protein variants affecting COVID-19 susceptibility and repurposing therapeutics

Scientific reports, 2024-06, Vol.14 (1), p.14208-19, Article 14208

2024

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Gene3D: expanding the utility of domain assignments

Nucleic acids research, 2016-01, Vol.44 (D1), p.D404

2016

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An analysis of tissue-specific alternative splicing at the protein level

PLoS computational biology, 2020-10, Vol.16 (10), p.e1008287-e1008287

2020

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Low-Density Lipoprotein Receptor Gene Familial Hypercholesterolemia Variant Database: Update and Pathological Assessment

Annals of human genetics, 2012-09, Vol.76 (5), p.387-401

2012

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Analysis of temporal transcription expression profiles reveal links between protein function and developmental stages of Drosophila melanogaster

PLoS computational biology, 2017-10, Vol.13 (10), p.e1005791-e1005791

2017

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Exploring the evolution of novel enzyme functions within structurally defined protein superfamilies

PLoS computational biology, 2012-03, Vol.8 (3), p.e1002403-e1002403

2012

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Alpha Helices Are More Robust to Mutations than Beta Strands

PLoS computational biology, 2016-12, Vol.12 (12), p.e1005242-e1005242

2016

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Inferring function using patterns of native disorder in proteins

PLoS computational biology, 2007-08, Vol.3 (8), p.e162-e162

2007

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An Ancient Fingerprint Indicates the Common Ancestry of Rossmann-Fold Enzymes Utilizing Different Ribose-Based Cofactors

PLoS biology, 2016-03, Vol.14 (3), p.e1002396-e1002396

2016

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ISCB's initial reaction to New England Journal of Medicine editorial on data sharing

Bioinformatics (Oxford, England), 2017-09, Vol.33 (18), p.2968-2968

2017

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Genome-wide RNA-Sequencing analysis identifies a distinct fibrosis gene signature in the conjunctiva after glaucoma surgery

Scientific reports, 2017-07, Vol.7 (1), p.5644-13, Article 5644

2017

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A Novel Group of Dynamin-Related Proteins Shared by Eukaryotes and Giant Viruses Is Able to Remodel Mitochondria From Within the Matrix

Molecular biology and evolution, 2023-06, Vol.40 (6)

2023

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InterPro in 2022

CATH: an expanded resource to predict protein function through structure and sequence

The InterPro protein families and domains database: 20 years on

CATH: increased structural coverage of functional space

VarSite: Disease variants and protein structure

Residue mutations and their impact on protein structure and function: detecting beneficial and pathogenic changes

Protein function prediction using domain families

Stability-activity tradeoffs constrain the adaptive evolution of RubisCO

CATH: expanding the horizons of structure-based functional annotations for genome sequences

Functional classification of CATH superfamilies: a domain-based approach for protein function annotation

Biological impact of mutually exclusive exon switching

Generating functional protein variants with variational autoencoders

New functional families (FunFams) in CATH to improve the mapping of conserved functional sites to 3D structures

Predicting human and viral protein variants affecting COVID-19 susceptibility and repurposing therapeutics

Gene3D: expanding the utility of domain assignments

An analysis of tissue-specific alternative splicing at the protein level

Low-Density Lipoprotein Receptor Gene Familial Hypercholesterolemia Variant Database: Update and Pathological Assessment

Analysis of temporal transcription expression profiles reveal links between protein function and developmental stages of Drosophila melanogaster

Exploring the evolution of novel enzyme functions within structurally defined protein superfamilies

Alpha Helices Are More Robust to Mutations than Beta Strands

Inferring function using patterns of native disorder in proteins

An Ancient Fingerprint Indicates the Common Ancestry of Rossmann-Fold Enzymes Utilizing Different Ribose-Based Cofactors

ISCB's initial reaction to New England Journal of Medicine editorial on data sharing

Genome-wide RNA-Sequencing analysis identifies a distinct fibrosis gene signature in the conjunctiva after glaucoma surgery

A Novel Group of Dynamin-Related Proteins Shared by Eukaryotes and Giant Viruses Is Able to Remodel Mitochondria From Within the Matrix

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