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Widespread expression of the ancient HERV-K (HML-2) provirus group in normal human tissues

PLoS biology, 2022-10, Vol.20 (10), p.e3001826

2022

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discovery of HTLV-1, the first pathogenic human retrovirus

Proceedings of the National Academy of Sciences - PNAS, 2015-12, Vol.112 (51), p.15525-15529

Coffin, John M

2015

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Effects of retroviruses on host genome function

Annual review of genetics, 2008-01, Vol.42 (1), p.709-732

2008

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Discovery of unfixed endogenous retrovirus insertions in diverse human populations

Proceedings of the National Academy of Sciences - PNAS, 2016-04, Vol.113 (16), p.E2326-E2334

2016

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Clinical Trial of the Anti-PD-L1 Antibody BMS-936559 in HIV-1 Infected Participants on Suppressive Antiretroviral Therapy

The Journal of infectious diseases, 2017-06, Vol.215 (11), p.1725-1733

2017

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Quantification of HIV-1 latency reversal in resting CD4⁺ T cells from patients on suppressive antiretroviral therapy

Proceedings of the National Academy of Sciences - PNAS, 2014-05, Vol.111 (19), p.7078-7083

2014

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Single-cell analysis of HIV-1 transcriptional activity reveals expression of proviruses in expanded clones during ART

Proceedings of the National Academy of Sciences - PNAS, 2017-05, Vol.114 (18), p.E3659-E3668

2017

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HIV-1 in lymph nodes is maintained by cellular proliferation during antiretroviral therapy

The Journal of clinical investigation, 2019-11, Vol.129 (11), p.4629-4642

2019

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Virions at the gates: receptors and the host-virus arms race

PLoS biology, 2013-05, Vol.11 (5), p.e1001574-e1001574

Coffin, John M

2013

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Antiretroviral intensification and valproic acid lack sustained effect on residual HIV-1 viremia or resting CD4+ cell infection

PloS one, 2010-02, Vol.5 (2), p.e9390-e9390

2010

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The effect of raltegravir intensification on low-level residual viremia in HIV-infected patients on antiretroviral therapy: a randomized controlled trial

PLoS medicine, 2010-08, Vol.7 (8), p.e1000321

2010

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Flexible Use of Nuclear Import Pathways by HIV-1

Cell host & microbe, 2010-03, Vol.7 (3), p.221-233

2010

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Low-Level Viremia Persists for at Least 7 Years in Patients on Suppressive Antiretroviral Therapy

Proceedings of the National Academy of Sciences - PNAS, 2008-03, Vol.105 (10), p.3879-3884

2008

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Immediate antiviral therapy appears to restrict resting CD4⁺ cell HIV-1 infection without accelerating the decay of latent infection

Proceedings of the National Academy of Sciences - PNAS, 2012-06, Vol.109 (24), p.9523-9528

2012

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Majority of CD4+T cells from peripheral blood of HIV-1—infected individuals contain only one HIV DNA molecule

Proceedings of the National Academy of Sciences - PNAS, 2011-07, Vol.108 (27), p.11199-11204

2011

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An analytical pipeline for identifying and mapping the integration sites of HIV and other retroviruses

BMC genomics, 2020-03, Vol.21 (1), p.216-20, Article 216

2020

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High efficiency of HIV-1 genomic RNA packaging and heterozygote formation revealed by single virion analysis

Proceedings of the National Academy of Sciences - PNAS, 2009-08, Vol.106 (32), p.13535-13540

2009

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Single-strand specificity of APOBEC3G accounts for minus-strand deamination of the HIV genome

Nature structural & molecular biology, 2004-05, Vol.11 (5), p.435-442

2004

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Estimate of effective recombination rate and average selection coefficient for HIV in chronic infection

Proceedings of the National Academy of Sciences - PNAS, 2011-04, Vol.108 (14), p.5661-5666

2011

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50th anniversary of the discovery of reverse transcriptase

Molecular biology of the cell, 2021-01, Vol.32 (2), p.91-97

2021

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HIV Population Dynamics in Vivo: Implications for Genetic Variation, Pathogenesis, and Therapy

Science (American Association for the Advancement of Science), 1995-01, Vol.267 (5197), p.483-489

Coffin, John M.

1995

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Clones of infected cells arise early in HIV-infected individuals

JCI insight, 2019-06, Vol.4 (12)

2019

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The Solitary Wave of Asexual Evolution

Proceedings of the National Academy of Sciences - PNAS, 2003-01, Vol.100 (2), p.587-592

2003

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Correction to: An analytical pipeline for identifying and mapping the integration sites of HIV and other retroviruses

BMC genomics, 2020-07, Vol.21 (1), p.1-517, Article 517

2020

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Human Endogenous Retrovirus K Solo-LTR Formation and Insertional Polymorphisms: Implications for Human and Viral Evolution

Proceedings of the National Academy of Sciences - PNAS, 2004-02, Vol.101 (6), p.1668-1672

2004

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Widespread expression of the ancient HERV-K (HML-2) provirus group in normal human tissues

discovery of HTLV-1, the first pathogenic human retrovirus

Effects of retroviruses on host genome function

Discovery of unfixed endogenous retrovirus insertions in diverse human populations

Clinical Trial of the Anti-PD-L1 Antibody BMS-936559 in HIV-1 Infected Participants on Suppressive Antiretroviral Therapy

Quantification of HIV-1 latency reversal in resting CD4⁺ T cells from patients on suppressive antiretroviral therapy

Single-cell analysis of HIV-1 transcriptional activity reveals expression of proviruses in expanded clones during ART

HIV-1 in lymph nodes is maintained by cellular proliferation during antiretroviral therapy

Virions at the gates: receptors and the host-virus arms race

Antiretroviral intensification and valproic acid lack sustained effect on residual HIV-1 viremia or resting CD4+ cell infection

The effect of raltegravir intensification on low-level residual viremia in HIV-infected patients on antiretroviral therapy: a randomized controlled trial

Flexible Use of Nuclear Import Pathways by HIV-1

Low-Level Viremia Persists for at Least 7 Years in Patients on Suppressive Antiretroviral Therapy

Immediate antiviral therapy appears to restrict resting CD4⁺ cell HIV-1 infection without accelerating the decay of latent infection

Majority of CD4+T cells from peripheral blood of HIV-1—infected individuals contain only one HIV DNA molecule

An analytical pipeline for identifying and mapping the integration sites of HIV and other retroviruses

High efficiency of HIV-1 genomic RNA packaging and heterozygote formation revealed by single virion analysis

Single-strand specificity of APOBEC3G accounts for minus-strand deamination of the HIV genome

Estimate of effective recombination rate and average selection coefficient for HIV in chronic infection

50th anniversary of the discovery of reverse transcriptase

HIV Population Dynamics in Vivo: Implications for Genetic Variation, Pathogenesis, and Therapy

Clones of infected cells arise early in HIV-infected individuals

The Solitary Wave of Asexual Evolution

Correction to: An analytical pipeline for identifying and mapping the integration sites of HIV and other retroviruses

Human Endogenous Retrovirus K Solo-LTR Formation and Insertional Polymorphisms: Implications for Human and Viral Evolution

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