Details

Autor(en) / Beteiligte

• Kim, Sunghwan
• Chen, Jie
• Cheng, Tiejun
• Gindulyte, Asta
• He, Jia
• He, Siqian
• Li, Qingliang
• Shoemaker, Benjamin A
• Thiessen, Paul A
• Yu, Bo
• Zaslavsky, Leonid
• Zhang, Jian
• Bolton, Evan E

Titel

PubChem 2023 update

Ist Teil von

• Nucleic acids research, 2023-01, Vol.51 (D1), p.D1373

Ort / Verlag

England

Erscheinungsjahr

2023

Link zum Volltext

Beschreibungen/Notizen

• PubChem (https://pubchem.ncbi.nlm.nih.gov) is a popular chemical information resource that serves a wide range of use cases. In the past two years, a number of changes were made to PubChem. Data from more than 120 data sources was added to PubChem. Some major highlights include: the integration of Google Patents data into PubChem, which greatly expanded the coverage of the PubChem Patent data collection; the creation of the Cell Line and Taxonomy data collections, which provide quick and easy access to chemical information for a given cell line and taxon, respectively; and the update of the bioassay data model. In addition, new functionalities were added to the PubChem programmatic access protocols, PUG-REST and PUG-View, including support for target-centric data download for a given protein, gene, pathway, cell line, and taxon and the addition of the 'standardize' option to PUG-REST, which returns the standardized form of an input chemical structure. A significant update was also made to PubChemRDF. The present paper provides an overview of these changes.