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A comparison of dynamic distributions of intestinal microbiota between Large White and Chinese Shanxi Black pigs
Ist Teil von
Archives of microbiology, 2019-04, Vol.201 (3), p.357-367
Ort / Verlag
Berlin/Heidelberg: Springer Berlin Heidelberg
Erscheinungsjahr
2019
Quelle
Alma/SFX Local Collection
Beschreibungen/Notizen
Intestinal microbiota has been widely recognized to influence on their hosts with respect to digestion and absorption of nutrients, but little is known about the structure and composition of microbial communities at different growth periods of hosts as yet. In this case, 16S rRNA gene amplicon sequencing was applied to decode the microbiota architecture in four distinct intestinal compartments (duodenum, jejunum, ileum, and cecum) of both Large White pigs and Chinese Shanxi Black pigs at the weaning, nursery, and fast-growth developmental stages. In our study, the intestinal ecosystems were dynamically changing and influenced by host maturity and diets at different development stages. Species phylogenetically affiliated to phyla
Firmicutes, Proteobacteria
, and
Bacteroidetes
were abundant in both pig breeds; at the genus level, microbial communities were dominated by
Prevotella
, followed by
Acinetobacter
and
Lactobacillus
. Further inspection revealed that
Lactobacillus
was identified to be positively associated with villus height, whereas
Acinetobacter
and
Prevotella
were prone to reside in deep crypts. Furthermore, intestinal microbiota in Shanxi Black pigs had more metabolic and less infectious functions than that in Large White pigs. In short, our data present here indicated that microbiota with longitudinal diversity and lower infection in Shanxi Black pigs might contribute to the relatively stronger adaptability in comparison with Large White pigs.